Variant report

Variant	rs71474200
Chromosome Location	chr11:47041936-47041937
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1805201	chr11:46971012-47063429	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	esv1819852	chr11:46971012-47064542	Enhancers Weak transcription ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
3	nsv1043108	chr11:47041565-47117248	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:47026600-47042200	Weak transcription	Small Intestine	intestine
2	chr11:47026800-47080200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr11:47027200-47042000	Weak transcription	Brain Hippocampus Middle	brain
4	chr11:47027400-47056000	Weak transcription	Fetal Intestine Small	intestine
5	chr11:47027800-47048000	Weak transcription	Primary hematopoietic stem cells	blood
6	chr11:47033000-47042000	Weak transcription	Fetal Lung	lung
7	chr11:47039600-47042000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr11:47040600-47043000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
9	chr11:47041000-47042400	Enhancers	Cortex derived primary cultured neurospheres	brain
10	chr11:47041000-47043600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr11:47041400-47043400	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr11:47041600-47042200	Enhancers	iPS-20b Cell Line	embryonic stem cell
13	chr11:47041600-47042400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr11:47041600-47043200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr11:47041600-47043400	Enhancers	GM12878-XiMat	blood
16	chr11:47041600-47043600	Enhancers	H1 Cell Line	embryonic stem cell
17	chr11:47041600-47043600	Enhancers	HUES48 Cell Line	embryonic stem cell
18	chr11:47041600-47043800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr11:47041800-47044800	Weak transcription	Hela-S3	cervix

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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