Variant report

Variant	rs7147966
Chromosome Location	chr14:83417147-83417148
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs12889201	0.86[ASN][1000 genomes]
rs17117745	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1954084	0.90[ASN][1000 genomes]
rs1954088	0.90[ASN][1000 genomes]
rs6574733	0.86[ASN][1000 genomes]
rs876290	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv565333	chr14:83397783-83437617	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	diseases
2	nsv456348	chr14:83415104-83443695	Enhancers Weak transcription Active TSS Flanking Active TSS	lncRNA	n/a	inside rSNPs	diseases
3	nsv565334	chr14:83415104-83443695	Flanking Active TSS Weak transcription Enhancers Active TSS	lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:83413200-83417200	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr14:83417000-83418400	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr14:83417000-83418600	Enhancers	HUES48 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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