Variant report

Variant	rs7149826
Chromosome Location	chr14:67765087-67765088
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:67764986..67767272-chr14:67772227..67775004,2	K562	blood:
2	chr14:67764235..67766111-chr14:67767999..67769720,2	K562	blood:
3	chr14:67758687..67760366-chr14:67763753..67765860,2	K562	blood:

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10083528	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10129218	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10130606	0.84[EUR][1000 genomes]
rs10135565	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10136835	0.84[EUR][1000 genomes]
rs10140203	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10141049	0.84[EUR][1000 genomes]
rs10144002	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10145458	0.84[EUR][1000 genomes]
rs10148114	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10150612	0.84[EUR][1000 genomes]
rs13379087	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13379190	0.84[EUR][1000 genomes]
rs13379449	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104018	0.84[EUR][1000 genomes]
rs28410937	0.84[EUR][1000 genomes]
rs28477898	1.00[ASN][1000 genomes]
rs28503899	0.84[EUR][1000 genomes]
rs35236021	0.84[EUR][1000 genomes]
rs57402080	0.85[EUR][1000 genomes]
rs59231326	0.85[EUR][1000 genomes]
rs59984712	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6573767	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7144147	0.84[EUR][1000 genomes]
rs7154820	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7157676	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8008820	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8012994	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8013980	0.84[EUR][1000 genomes]
rs8014465	0.84[EUR][1000 genomes]
rs8015912	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs8016480	0.84[EUR][1000 genomes]
rs8020334	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8022938	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751285	chr14:67364747-67886781	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
2	nsv1045518	chr14:67529049-67959582	Strong transcription Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
3	nsv832821	chr14:67590418-67828169	Flanking Active TSS Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
4	nsv456331	chr14:67732861-68103780	Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
5	nsv564961	chr14:67732861-68103780	Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
6	nsv470651	chr14:67732861-68113293	Active TSS Strong transcription Flanking Active TSS Weak transcription Genic enhancers Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
7	nsv902065	chr14:67739285-67819602	Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:97 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:67721400-67798400	Weak transcription	Hela-S3	cervix
2	chr14:67730800-67769800	Weak transcription	Primary T helper cells PMA-I stimulated	--
3	chr14:67732400-67810000	Weak transcription	Gastric	stomach
4	chr14:67734800-67768600	Weak transcription	GM12878-XiMat	blood
5	chr14:67735400-67771600	Weak transcription	NHEK	skin
6	chr14:67735400-67778600	Weak transcription	Sigmoid Colon	Sigmoid Colon
7	chr14:67735400-67798400	Weak transcription	K562	blood
8	chr14:67735600-67770000	Weak transcription	Fetal Muscle Trunk	muscle
9	chr14:67735600-67772000	Weak transcription	Lung	lung
10	chr14:67735600-67810000	Weak transcription	Aorta	Aorta
11	chr14:67736200-67768600	Weak transcription	Fetal Thymus	thymus
12	chr14:67736600-67770600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
13	chr14:67737000-67768200	Weak transcription	HMEC	breast
14	chr14:67737000-67768400	Weak transcription	A549	lung
15	chr14:67737000-67769800	Weak transcription	Ovary	ovary
16	chr14:67737000-67777600	Weak transcription	HepG2	liver
17	chr14:67737200-67768000	Weak transcription	Osteobl	bone
18	chr14:67737200-67772200	Weak transcription	Fetal Muscle Leg	muscle
19	chr14:67737200-67801400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
20	chr14:67737400-67768600	Weak transcription	NHDF-Ad	bronchial
21	chr14:67738200-67778600	Weak transcription	HSMMtube	muscle
22	chr14:67738200-67786400	Weak transcription	Primary B cells from peripheral blood	blood
23	chr14:67738400-67769200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr14:67738600-67772000	Weak transcription	Fetal Stomach	stomach
25	chr14:67739600-67770600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr14:67739800-67765600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr14:67739800-67768200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr14:67739800-67769600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
29	chr14:67739800-67769800	Weak transcription	Primary T cells from cord blood	blood
30	chr14:67739800-67770200	Weak transcription	Primary hematopoietic stem cells	blood
31	chr14:67739800-67771600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
32	chr14:67739800-67778600	Weak transcription	Left Ventricle	heart
33	chr14:67740000-67769400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
34	chr14:67740000-67790600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
35	chr14:67743200-67771800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
36	chr14:67743400-67768600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
37	chr14:67744400-67769400	Weak transcription	Fetal Lung	lung
38	chr14:67744400-67769600	Weak transcription	HUES6 Cell Line	embryonic stem cell
39	chr14:67746000-67769200	Weak transcription	Duodenum Smooth Muscle	Duodenum
40	chr14:67746200-67768600	Weak transcription	Adipose Nuclei	Adipose
41	chr14:67746400-67768600	Weak transcription	Primary B cells from cord blood	blood
42	chr14:67749200-67768600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
43	chr14:67750000-67801400	Weak transcription	Fetal Heart	heart
44	chr14:67753000-67769400	Weak transcription	Fetal Kidney	kidney
45	chr14:67753600-67799200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
46	chr14:67753800-67791200	Weak transcription	Thymus	Thymus
47	chr14:67755000-67772000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
48	chr14:67755200-67772000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr14:67755800-67788000	Weak transcription	NHLF	lung
50	chr14:67756400-67769400	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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