Variant report

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs13284742	0.86[ASN][1000 genomes]
rs13293715	0.86[ASN][1000 genomes]
rs13301268	0.86[ASN][1000 genomes]
rs13301972	0.81[EUR][1000 genomes]
rs2188042	0.82[EUR][1000 genomes]
rs34302658	0.80[EUR][1000 genomes]
rs34466382	0.86[ASN][1000 genomes]
rs34568491	0.86[ASN][1000 genomes]
rs34581742	0.86[ASN][1000 genomes]
rs34705596	0.83[ASN][1000 genomes]
rs34728021	0.86[ASN][1000 genomes]
rs34748014	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34816653	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34928792	0.86[ASN][1000 genomes]
rs34938648	0.82[ASN][1000 genomes]
rs35132145	0.86[ASN][1000 genomes]
rs35203429	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35433621	0.86[ASN][1000 genomes]
rs35545236	0.82[EUR][1000 genomes]
rs35770937	0.82[ASN][1000 genomes]
rs35976675	0.80[EUR][1000 genomes]
rs36007561	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs36078239	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs60262778	0.86[ASN][1000 genomes]
rs71505542	0.82[ASN][1000 genomes]
rs71505544	0.86[ASN][1000 genomes]
rs71505546	0.81[EUR][1000 genomes]
rs71505550	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv615251	chr9:117975864-118514444	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv948346	chr9:118107565-118718197	Enhancers Bivalent Enhancer Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
3	esv2761552	chr9:118113846-118157488	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:118150000-118153800	Weak transcription	Fetal Kidney	kidney
2	chr9:118150000-118155800	Weak transcription	Adipose Nuclei	Adipose
3	chr9:118150000-118158000	Weak transcription	Stomach Smooth Muscle	stomach
4	chr9:118150400-118153000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr9:118150400-118153400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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