The 2.0 version of rSNPBase

Variant report

Variant rs71592765
Chromosome Location chr5:108091000-108091001
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:108085600-108091000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr5:108085600-108102600 Weak transcription Lung lung
3 chr5:108085600-108119800 Weak transcription Left Ventricle heart
4 chr5:108085800-108094400 Weak transcription Brain Anterior Caudate brain
5 chr5:108085800-108095200 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr5:108085800-108095200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr5:108085800-108095400 Weak transcription Primary B cells from cord blood blood
8 chr5:108085800-108095400 Weak transcription A549 lung
9 chr5:108085800-108097800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr5:108085800-108097800 Weak transcription Brain Angular Gyrus brain
11 chr5:108086200-108092800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr5:108086200-108095400 Weak transcription Primary T cells from cord blood blood
13 chr5:108086200-108095400 Weak transcription Fetal Lung lung
14 chr5:108086200-108095600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr5:108086200-108119200 Weak transcription Fetal Kidney kidney
16 chr5:108086200-108120600 Weak transcription Brain Hippocampus Middle brain
17 chr5:108086400-108094200 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr5:108086400-108095000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr5:108086600-108091000 Weak transcription Fetal Brain Male brain
20 chr5:108088400-108095400 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr5:108088600-108097800 Weak transcription Gastric stomach
22 chr5:108089400-108094400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr5:108089600-108092000 Weak transcription GM12878-XiMat blood
24 chr5:108089800-108095400 Weak transcription HSMMtube muscle
25 chr5:108089800-108119400 Weak transcription Hela-S3 cervix
26 chr5:108089800-108119800 Weak transcription HSMM muscle
27 chr5:108090000-108092800 Weak transcription Colon Smooth Muscle Colon
28 chr5:108090000-108095000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr5:108090000-108095200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr5:108090000-108095600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr5:108090000-108095600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr5:108090000-108105000 Weak transcription NHLF lung
33 chr5:108090000-108109800 Weak transcription Adipose Nuclei Adipose
34 chr5:108090200-108094200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr5:108090200-108094400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr5:108090200-108100600 Weak transcription NHDF-Ad bronchial
37 chr5:108090200-108127600 Weak transcription NH-A brain
38 chr5:108090600-108095400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr5:108090600-108095600 Weak transcription NHEK skin
40 chr5:108090600-108096000 Weak transcription HMEC breast
41 chr5:108090800-108091000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr5:108090800-108092800 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr5:108091000-108094200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015