| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1005278 |
chr1:179197645-179371395 |
Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionmiRNA target site
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
esv2762031 |
chr1:179323738-179375197 |
Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv518403 |
chr1:179323919-179371973 |
Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv548279 |
chr1:179323919-179390148 |
Enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
esv3514400 |
chr1:179349344-179400533 |
Enhancers Active TSS ZNF genes & repeats Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
esv3514401 |
chr1:179349344-179400533 |
Weak transcription Enhancers ZNF genes & repeats Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
rSNPs within LD-proxies of this variant (count:1)
