Variant report

Variant rs7164539
Chromosome Location chr15:40447923-40447924
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:40442800-40448200 Weak transcription Fetal Kidney kidney
2 chr15:40443200-40452800 Weak transcription Primary hematopoietic stem cells short term culture blood
3 chr15:40444400-40448400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr15:40445800-40448200 Enhancers Placenta Placenta
5 chr15:40446400-40448600 Enhancers NHEK skin
6 chr15:40446400-40449400 Enhancers H1 Cell Line embryonic stem cell
7 chr15:40446600-40448200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr15:40446600-40448800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr15:40446800-40448200 Enhancers Placenta Amnion Placenta Amnion
10 chr15:40446800-40448400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr15:40446800-40448400 Enhancers HMEC breast
12 chr15:40446800-40448600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr15:40446800-40448800 Enhancers ES-I3 Cell Line embryonic stem cell
14 chr15:40446800-40448800 Enhancers Pancreas Pancrea
15 chr15:40446800-40450400 Enhancers H9 Cell Line embryonic stem cell
16 chr15:40447000-40448200 Enhancers Sigmoid Colon Sigmoid Colon
17 chr15:40447000-40448400 Enhancers Rectal Mucosa Donor 31 rectum
18 chr15:40447000-40448800 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr15:40447000-40449800 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr15:40447200-40448200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr15:40447200-40448400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr15:40447200-40448600 Enhancers Esophagus oesophagus
23 chr15:40447400-40448800 Enhancers GM12878-XiMat blood
24 chr15:40447600-40448000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr15:40447600-40448000 Flanking Active TSS HUES64 Cell Line embryonic stem cell
26 chr15:40447600-40448000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
27 chr15:40447600-40448000 Enhancers Duodenum Mucosa Duodenum
28 chr15:40447600-40448400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr15:40447600-40448600 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
30 chr15:40447600-40448600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
31 chr15:40447600-40448600 Enhancers Fetal Thymus thymus
32 chr15:40447600-40448600 Enhancers Lung lung
33 chr15:40447600-40449200 Enhancers Stomach Mucosa stomach
34 chr15:40447800-40448000 Flanking Active TSS HUES6 Cell Line embryonic stem cell
35 chr15:40447800-40448000 Enhancers Fetal Intestine Large intestine
36 chr15:40447800-40448200 Enhancers Colonic Mucosa Colon
37 chr15:40447800-40448400 Enhancers Fetal Intestine Small intestine
38 chr15:40447800-40448400 Enhancers Rectal Mucosa Donor 29 rectum
39 chr15:40447800-40448400 Enhancers Small Intestine intestine
40 chr15:40447800-40448600 Flanking Active TSS HUES48 Cell Line embryonic stem cell
41 chr15:40447800-40448600 Enhancers Gastric stomach
42 chr15:40447800-40448800 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
43 chr15:40447800-40451000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
44 chr15:40447800-40452800 Weak transcription ES-WA7 Cell Line embryonic stem cell
45 chr15:40447800-40452800 Weak transcription Right Atrium heart

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