Variant report

Variant	rs7166718
Chromosome Location	chr15:82442782-82442783
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr15:82432771..82435316-chr15:82440344..82442929,2	K562	blood:
2	chr15:82436170..82438701-chr15:82440898..82443839,3	MCF-7	breast:
3	chr15:82440975..82444665-chr15:82449523..82452349,3	K562	blood:
4	chr15:82431499..82434866-chr15:82441915..82444519,3	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs11633803	1.00[YRI][hapmap]
rs34686959	0.81[AFR][1000 genomes]
rs7183805	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833067	chr15:82234980-82450485	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:82399000-82452200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr15:82408000-82443600	Weak transcription	Aorta	Aorta
3	chr15:82416200-82443400	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr15:82416200-82452400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr15:82416400-82454000	Weak transcription	Colonic Mucosa	Colon
6	chr15:82416600-82443800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr15:82419200-82470600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr15:82420000-82457000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
9	chr15:82420400-82458400	Weak transcription	HepG2	liver
10	chr15:82421200-82443800	Weak transcription	Stomach Smooth Muscle	stomach
11	chr15:82423000-82443600	Weak transcription	Right Ventricle	heart
12	chr15:82423000-82443800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
13	chr15:82423200-82443800	Weak transcription	Psoas Muscle	Psoas
14	chr15:82423200-82454800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
15	chr15:82425000-82443400	Weak transcription	Fetal Intestine Small	intestine
16	chr15:82425800-82443200	Weak transcription	Fetal Brain Female	brain
17	chr15:82426000-82457000	Weak transcription	Pancreatic Islets	Pancreatic Islet
18	chr15:82426800-82443400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
19	chr15:82426800-82443600	Weak transcription	Gastric	stomach
20	chr15:82426800-82443600	Weak transcription	Spleen	Spleen
21	chr15:82427000-82443400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr15:82427200-82443600	Weak transcription	Cortex derived primary cultured neurospheres	brain
23	chr15:82427600-82443000	Weak transcription	Brain Germinal Matrix	brain
24	chr15:82427600-82456600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr15:82428400-82443600	Weak transcription	Pancreas	Pancrea
26	chr15:82430400-82452400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
27	chr15:82430400-82455200	Weak transcription	Rectal Smooth Muscle	rectum
28	chr15:82431000-82443400	Weak transcription	Duodenum Smooth Muscle	Duodenum
29	chr15:82431200-82443000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
30	chr15:82431200-82443200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
31	chr15:82431200-82443400	Weak transcription	HUES48 Cell Line	embryonic stem cell
32	chr15:82431200-82443400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
33	chr15:82431200-82443600	Weak transcription	HUES64 Cell Line	embryonic stem cell
34	chr15:82431200-82443600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
35	chr15:82431200-82443600	Weak transcription	Thymus	Thymus
36	chr15:82431200-82443800	Weak transcription	Fetal Muscle Trunk	muscle
37	chr15:82431200-82448200	Weak transcription	Primary T helper cells PMA-I stimulated	--
38	chr15:82431200-82450000	Weak transcription	GM12878-XiMat	blood
39	chr15:82431200-82452400	Weak transcription	Esophagus	oesophagus
40	chr15:82431200-82455000	Weak transcription	H1 Cell Line	embryonic stem cell
41	chr15:82431200-82461200	Weak transcription	Small Intestine	intestine
42	chr15:82431400-82443600	Weak transcription	Fetal Thymus	thymus
43	chr15:82432600-82443000	Weak transcription	Brain Cingulate Gyrus	brain
44	chr15:82432600-82443400	Weak transcription	HUES6 Cell Line	embryonic stem cell
45	chr15:82432600-82443600	Weak transcription	Adipose Nuclei	Adipose
46	chr15:82432600-82443600	Weak transcription	Brain Angular Gyrus	brain
47	chr15:82432600-82443600	Weak transcription	Ovary	ovary
48	chr15:82432600-82443800	Weak transcription	Brain Anterior Caudate	brain
49	chr15:82432600-82445400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
50	chr15:82432600-82454800	Weak transcription	Brain Inferior Temporal Lobe	brain

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