Variant report
| Variant | rs7169117 |
|---|---|
| Chromosome Location | chr15:52578449-52578450 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:52524400-52579400 | Weak transcription | Small Intestine | intestine |
| 2 | chr15:52550000-52579200 | Weak transcription | Fetal Kidney | kidney |
| 3 | chr15:52554800-52582200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 4 | chr15:52555000-52585000 | Weak transcription | Left Ventricle | heart |
| 5 | chr15:52555200-52580600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 6 | chr15:52556000-52587000 | Weak transcription | Brain Hippocampus Middle | brain |
| 7 | chr15:52558800-52579400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 8 | chr15:52559400-52580600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 9 | chr15:52561400-52580600 | Weak transcription | Spleen | Spleen |
| 10 | chr15:52565800-52587000 | Weak transcription | Right Atrium | heart |
| 11 | chr15:52568600-52579400 | Weak transcription | Stomach Mucosa | stomach |
| 12 | chr15:52568800-52580000 | Weak transcription | Colonic Mucosa | Colon |
| 13 | chr15:52570800-52580800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 14 | chr15:52571200-52581000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 15 | chr15:52571200-52585800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 16 | chr15:52571200-52587000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 17 | chr15:52571400-52580600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 18 | chr15:52571400-52580600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 19 | chr15:52571600-52579200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 20 | chr15:52571600-52579200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 21 | chr15:52572800-52579800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 22 | chr15:52574000-52580200 | Weak transcription | Right Ventricle | heart |
| 23 | chr15:52574400-52579200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 24 | chr15:52574400-52580400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 25 | chr15:52574600-52587000 | Weak transcription | Brain Anterior Caudate | brain |
| 26 | chr15:52575000-52579400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 27 | chr15:52575000-52585000 | Weak transcription | Fetal Stomach | stomach |
| 28 | chr15:52575200-52580600 | Weak transcription | Adipose Nuclei | Adipose |
| 29 | chr15:52575400-52579200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 30 | chr15:52575400-52579200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 31 | chr15:52575400-52581000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 32 | chr15:52575400-52582000 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 33 | chr15:52575800-52579200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 34 | chr15:52575800-52579200 | Weak transcription | HepG2 | liver |
| 35 | chr15:52575800-52579400 | Weak transcription | Pancreas | Pancrea |
| 36 | chr15:52575800-52580400 | Weak transcription | Esophagus | oesophagus |
| 37 | chr15:52575800-52580600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 38 | chr15:52575800-52580800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 39 | chr15:52576000-52579400 | Weak transcription | Liver | Liver |
| 40 | chr15:52577000-52579000 | Weak transcription | A549 | lung |
| 41 | chr15:52577000-52579200 | Weak transcription | Hela-S3 | cervix |
| 42 | chr15:52577400-52582000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 43 | chr15:52578000-52579200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 44 | chr15:52578000-52580000 | Weak transcription | Gastric | stomach |
| 45 | chr15:52578000-52580400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 46 | chr15:52578200-52580600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 47 | chr15:52578400-52579400 | Weak transcription | Fetal Intestine Small | intestine |
| 48 | chr15:52578400-52580600 | Weak transcription | H1 Cell Line | embryonic stem cell |
