Variant report
| Variant | rs717197 |
|---|---|
| Chromosome Location | chr12:29699088-29699089 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:29665400-29725400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 2 | chr12:29668800-29706000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 3 | chr12:29668800-29716600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 4 | chr12:29673600-29708800 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 5 | chr12:29688200-29705400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 6 | chr12:29689400-29700000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 7 | chr12:29691000-29705800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 8 | chr12:29691200-29709200 | Weak transcription | HMEC | breast |
| 9 | chr12:29693000-29705600 | Weak transcription | Hela-S3 | cervix |
| 10 | chr12:29696400-29706000 | Weak transcription | Aorta | Aorta |
| 11 | chr12:29696600-29699200 | Weak transcription | HSMMtube | muscle |
| 12 | chr12:29696600-29700000 | Weak transcription | Adipose Nuclei | Adipose |
| 13 | chr12:29696600-29705600 | Weak transcription | Osteobl | bone |
| 14 | chr12:29696800-29699600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 15 | chr12:29697200-29699200 | Enhancers | GM12878-XiMat | blood |
| 16 | chr12:29697200-29701400 | Enhancers | Fetal Muscle Leg | muscle |
| 17 | chr12:29697400-29700000 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 18 | chr12:29697400-29700600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 19 | chr12:29697400-29701400 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 20 | chr12:29697600-29699200 | Weak transcription | Lung | lung |
| 21 | chr12:29697800-29700400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 22 | chr12:29698000-29699200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 23 | chr12:29698000-29699200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 24 | chr12:29698000-29699600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 25 | chr12:29698000-29700000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 26 | chr12:29698000-29701200 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 27 | chr12:29698000-29701400 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 28 | chr12:29698200-29699800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 29 | chr12:29698200-29700000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 30 | chr12:29698200-29712600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 31 | chr12:29698600-29701200 | Enhancers | NHDF-Ad | bronchial |
| 32 | chr12:29698800-29699400 | Enhancers | H9 Cell Line | embryonic stem cell |
| 33 | chr12:29698800-29699400 | Genic enhancers | Fetal Stomach | stomach |
| 34 | chr12:29698800-29699400 | Enhancers | Left Ventricle | heart |
| 35 | chr12:29698800-29699600 | Genic enhancers | Muscle Satellite Cultured Cells | -- |
| 36 | chr12:29698800-29699800 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 37 | chr12:29698800-29700200 | Enhancers | Ovary | ovary |
| 38 | chr12:29698800-29701200 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 39 | chr12:29698800-29701200 | Enhancers | NHLF | lung |
| 40 | chr12:29699000-29699200 | Enhancers | Esophagus | oesophagus |
| 41 | chr12:29699000-29699200 | Enhancers | Fetal Muscle Trunk | muscle |
| 42 | chr12:29699000-29699200 | Enhancers | Stomach Smooth Muscle | stomach |
| 43 | chr12:29699000-29699400 | Enhancers | iPS DF 6.9 Cell Line | embryonic stem cell |
| 44 | chr12:29699000-29699400 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
| 45 | chr12:29699000-29699400 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 46 | chr12:29699000-29699400 | Genic enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 47 | chr12:29699000-29699400 | Enhancers | Duodenum Mucosa | Duodenum |
| 48 | chr12:29699000-29699400 | Enhancers | Right Atrium | heart |
| 49 | chr12:29699000-29699400 | Enhancers | Right Ventricle | heart |
| 50 | chr12:29699000-29699400 | Enhancers | Sigmoid Colon | Sigmoid Colon |
