The 2.0 version of rSNPBase

Variant report

Variant rs7172245
Chromosome Location chr15:49454427-49454428
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49448800-49456200 Weak transcription Gastric stomach
2 chr15:49448800-49461400 Weak transcription Small Intestine intestine
3 chr15:49448800-49461800 Weak transcription Colonic Mucosa Colon
4 chr15:49448800-49461800 Weak transcription Stomach Mucosa stomach
5 chr15:49448800-49462000 Weak transcription Placenta Placenta
6 chr15:49448800-49462000 Weak transcription Left Ventricle heart
7 chr15:49448800-49462000 Weak transcription Lung lung
8 chr15:49448800-49462200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr15:49448800-49462200 Weak transcription Ovary ovary
10 chr15:49448800-49462200 Weak transcription Pancreas Pancrea
11 chr15:49448800-49462200 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr15:49448800-49462400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr15:49448800-49462400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr15:49448800-49462400 Weak transcription Placenta Amnion Placenta Amnion
15 chr15:49448800-49462400 Weak transcription Spleen Spleen
16 chr15:49449000-49454800 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr15:49449000-49461600 Weak transcription Fetal Intestine Small intestine
18 chr15:49449000-49461800 Weak transcription Brain Germinal Matrix brain
19 chr15:49449000-49462000 Weak transcription Primary monocytes fromperipheralblood blood
20 chr15:49449000-49462000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr15:49449000-49462000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr15:49449000-49462000 Weak transcription Fetal Muscle Trunk muscle
23 chr15:49449000-49462000 Weak transcription Fetal Muscle Leg muscle
24 chr15:49449000-49462000 Weak transcription Stomach Smooth Muscle stomach
25 chr15:49449000-49462200 Weak transcription Thymus Thymus
26 chr15:49449200-49461600 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr15:49449200-49461800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr15:49449200-49462000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr15:49449200-49462000 Weak transcription Fetal Stomach stomach
30 chr15:49449200-49462000 Weak transcription Fetal Thymus thymus
31 chr15:49449200-49462000 Weak transcription NH-A brain
32 chr15:49449400-49454600 Weak transcription Brain Inferior Temporal Lobe brain
33 chr15:49449400-49458000 Weak transcription Brain Substantia Nigra brain
34 chr15:49449400-49461600 Weak transcription Brain Angular Gyrus brain
35 chr15:49449400-49461800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr15:49449400-49461800 Weak transcription Fetal Intestine Large intestine
37 chr15:49449400-49461800 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr15:49449400-49461800 Weak transcription Rectal Smooth Muscle rectum
39 chr15:49449400-49462000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr15:49449400-49462000 Weak transcription Fetal Brain Female brain
41 chr15:49449400-49462000 Weak transcription Fetal Lung lung
42 chr15:49449400-49462000 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr15:49449600-49454600 Weak transcription Brain Anterior Caudate brain
44 chr15:49449600-49461200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr15:49449600-49461600 Weak transcription NHDF-Ad bronchial
46 chr15:49449600-49461800 Weak transcription Primary B cells from cord blood blood
47 chr15:49449600-49461800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr15:49449600-49461800 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr15:49449600-49461800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr15:49449600-49461800 Weak transcription Fetal Brain Male brain

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Last update: Aug 31, 2015