Variant report

Variant	rs7172715
Chromosome Location	chr15:75287375-75287376
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	REST	chr15:75287193-75288199	U87	brain:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
2	REST	chr15:75287184-75288242	ECC-1	luminal epithelium:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
3	REST	chr15:75287308-75287971	HepG2	liver:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
4	TAF1	chr15:75287357-75288196	H1-neurons	neurons:	n/a	n/a
5	REST	chr15:75287246-75288065	H1-hESC	embryonic stem cell:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
6	REST	chr15:75287174-75287952	Hela-S3	cervix:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
7	REST	chr15:75287272-75288153	PANC-1	pancreas:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
8	REST	chr15:75287305-75288108	PANC-1	pancreas:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
9	REST	chr15:75287357-75287998	SK-N-SH	brain:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
10	POLR2A	chr15:75287318-75288816	H1-neurons	neurons:	n/a	n/a
11	REST	chr15:75287309-75288098	HepG2	liver:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
12	CHD2	chr15:75287368-75288182	K562	blood:	n/a	chr15:75287821-75287830 chr15:75288062-75288072
13	SIN3AK20	chr15:75287357-75288150	MCF-7	breast:	n/a	n/a
14	POLR2A	chr15:75287312-75288575	H1-neurons	neurons:	n/a	n/a
15	REST	chr15:75287278-75288030	HCT-116	colon:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
16	GATA3	chr15:75287372-75288210	A549	lung:	n/a	n/a
17	REST	chr15:75286975-75288179	PFSK-1	brain:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
18	REST	chr15:75287309-75288089	GM12878	blood:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
19	REST	chr15:75287015-75288029	PANC-1	pancreas:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
20	REST	chr15:75287206-75288055	HCT-116	colon:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
21	REST	chr15:75287313-75288006	K562	blood:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
22	REST	chr15:75287252-75288013	HL-60	blood:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
23	RCOR1	chr15:75287375-75288028	HepG2	liver:	n/a	n/a
24	REST	chr15:75286443-75288128	HL-60	blood:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75286894-75286907 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
25	HCFC1	chr15:75287245-75288250	Hela-S3	cervix:	n/a	n/a
26	REST	chr15:75287196-75288119	PFSK-1	brain:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
27	ZBTB33	chr15:75287369-75288117	SK-N-SH	brain:	n/a	chr15:75287816-75287831 chr15:75287821-75287830 chr15:75287776-75287791
28	REST	chr15:75287094-75288078	MCF-7	breast:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
29	REST	chr15:75287244-75288131	MCF-7	breast:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
30	REST	chr15:75287280-75288111	H1-hESC	embryonic stem cell:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
31	REST	chr15:75287197-75288006	K562	blood:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
32	REST	chr15:75287299-75287928	PFSK-1	brain:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
33	REST	chr15:75286914-75288263	A549	lung:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
34	REST	chr15:75286860-75288250	PFSK-1	brain:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75286894-75286907 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
35	REST	chr15:75287191-75288201	U87	brain:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
36	REST	chr15:75287007-75288029	PANC-1	pancreas:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
37	REST	chr15:75287212-75288046	GM12878	blood:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
38	REST	chr15:75287208-75288026	Hela-S3	cervix:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
39	REST	chr15:75287177-75288177	A549	lung:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
40	ZBTB33	chr15:75287312-75288142	A549	lung:	n/a	chr15:75287816-75287831 chr15:75287821-75287830 chr15:75287776-75287791
41	RCOR1	chr15:75287348-75288221	IMR90	lung:	n/a	n/a
42	REST	chr15:75287195-75288117	SK-N-SH	brain:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
43	REST	chr15:75287349-75288078	SK-N-SH	brain:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
44	REST	chr15:75287319-75288409	HepG2	liver:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
45	REST	chr15:75287084-75289111	H1-neurons	neurons:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75288695-75288708 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742 chr15:75288979-75288992
46	REST	chr15:75287153-75288094	ECC-1	luminal epithelium:	n/a	chr15:75287731-75287744 chr15:75287727-75287747 chr15:75287731-75287744 chr15:75287734-75287747 chr15:75288058-75288071 chr15:75287727-75287747 chr15:75287727-75287747 chr15:75287738-75287747 chr15:75287727-75287741 chr15:75287733-75287742
47	MYC	chr15:75287348-75287857	H1-hESC	embryonic stem cell:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr15:75287065..75288881-chr15:75303278..75305678,2	MCF-7	breast:
2	chr15:75286200..75292858-chr15:75303462..75309796,11	MCF-7	breast:
3	chr15:75246590..75249281-chr15:75285572..75288569,4	MCF-7	breast:
4	chr15:75249195..75251408-chr15:75284576..75287402,2	K562	blood:
5	chr15:75286466..75289268-chr15:75313854..75316191,2	MCF-7	breast:
6	chr15:75285958..75287550-chr15:75318167..75319943,2	MCF-7	breast:

Variant related genes	Relation type
SCAMP5	TF binding region
ENSG00000138621	Chromatin interaction
ENSG00000178718	Chromatin interaction
ENSG00000198794	Chromatin interaction
ENSG00000260483	Chromatin interaction

Extended variants
information (count: 59 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:57)

rs_ID	r²[population]
rs11072519	0.87[CEU][hapmap];0.81[AMR][1000 genomes]
rs12591175	0.82[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap]
rs12591994	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12592477	1.00[CEU][hapmap];0.95[JPT][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12593476	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12593542	0.89[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12594117	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2289582	0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs2304904	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28394281	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3812943	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3812946	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3816261	1.00[CEU][hapmap];0.94[JPT][hapmap];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3910748	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs55877218	0.92[ASN][1000 genomes]
rs56828495	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs56970592	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs58068887	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs58294763	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs58403754	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58645417	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs59094290	0.97[ASN][1000 genomes]
rs61166993	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6495135	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6495136	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6495137	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6495138	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6495140	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6495142	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7163390	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7166105	1.00[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7167415	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7168638	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7172065	1.00[CEU][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7172989	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7173218	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7174129	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7179097	0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7181942	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7182286	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7342591	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7342601	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73436579	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73436586	0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73438537	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73438554	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs74023908	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs74025863	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8031545	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8034149	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8036573	0.97[ASN][1000 genomes]
rs8040961	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9672926	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9672995	0.96[ASN][1000 genomes]
rs9672996	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9673012	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9788648	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv569993	chr15:75242155-75483752	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
2	nsv542435	chr15:75271788-75321117	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs7172715	SCAMP5	cis	Esophagus Mucosa	GTEx
rs7172715	SCAMP5	cis	Artery Tibial	GTEx
rs7172715	PPCDC	cis	Thyroid	GTEx
rs7172715	SCAMP5	cis	multi-tissue	Pritchard

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:75283200-75287400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr15:75283400-75287400	Weak transcription	HMEC	breast
3	chr15:75283400-75287400	Weak transcription	NHEK	skin
4	chr15:75283400-75287600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr15:75286400-75287400	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
6	chr15:75286400-75287800	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr15:75286600-75287400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
8	chr15:75286600-75287600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
9	chr15:75286600-75287600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr15:75286600-75287600	Flanking Active TSS	Brain Germinal Matrix	brain
11	chr15:75286600-75288400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
12	chr15:75286600-75289000	Active TSS	Brain Substantia Nigra	brain
13	chr15:75286600-75289600	Active TSS	Pancreatic Islets	Pancreatic Islet
14	chr15:75286800-75287400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr15:75286800-75287400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr15:75286800-75288600	Active TSS	Brain Cingulate Gyrus	brain
17	chr15:75286800-75288800	Active TSS	Brain Angular Gyrus	brain
18	chr15:75287000-75287600	Flanking Active TSS	Brain Anterior Caudate	brain
19	chr15:75287000-75287600	Flanking Active TSS	Fetal Brain Male	brain
20	chr15:75287000-75288600	Active TSS	Brain Hippocampus Middle	brain
21	chr15:75287200-75287400	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
22	chr15:75287200-75287400	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
23	chr15:75287200-75287400	Enhancers	Primary T helper naive cells from peripheral blood	blood
24	chr15:75287200-75287400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
25	chr15:75287200-75287400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
26	chr15:75287200-75287400	Enhancers	Ovary	ovary
27	chr15:75287200-75287400	Enhancers	A549	lung
28	chr15:75287200-75287400	Enhancers	HepG2	liver
29	chr15:75287200-75287600	Flanking Active TSS	Fetal Brain Female	brain
30	chr15:75287200-75288000	Active TSS	Sigmoid Colon	Sigmoid Colon
31	chr15:75287200-75288000	Active TSS	Stomach Smooth Muscle	stomach
32	chr15:75287200-75288200	Active TSS	Duodenum Smooth Muscle	Duodenum
33	chr15:75287200-75288600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
34	chr15:75287200-75289800	Active TSS	H9 Cell Line	embryonic stem cell

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