Variant report

Variant	rs7183703
Chromosome Location	chr15:92938342-92938343
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:92937393..92940056-chr15:92940490..92942465,3	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs34744002	0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3784744	0.81[ASN][1000 genomes]
rs7173401	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948621	chr15:92688981-93158095	Enhancers Bivalent/Poised TSS ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv1049561	chr15:92758434-93097965	Enhancers Weak transcription Bivalent/Poised TSS Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
3	nsv1037972	chr15:92804908-93270761	Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
4	nsv904499	chr15:92914795-93472582	Bivalent Enhancer Flanking Active TSS Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	163 gene(s)	inside rSNPs	diseases
5	esv3393959	chr15:92935948-92939196	Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:70 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:92935400-92938400	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
2	chr15:92935400-92938800	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
3	chr15:92935800-92938800	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
4	chr15:92936200-92938600	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
5	chr15:92936200-92939400	Active TSS	HSMM	muscle
6	chr15:92936400-92938600	Active TSS	Breast Myoepithelial Primary Cells	Breast
7	chr15:92936400-92938800	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr15:92936400-92938800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr15:92936400-92939200	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
10	chr15:92936600-92938400	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
11	chr15:92936600-92938400	Bivalent/Poised TSS	Muscle Satellite Cultured Cells	--
12	chr15:92936600-92938400	Enhancers	Pancreas	Pancrea
13	chr15:92936600-92938400	Active TSS	Right Atrium	heart
14	chr15:92936600-92938400	Bivalent/Poised TSS	Right Ventricle	heart
15	chr15:92936600-92938400	Active TSS	NHDF-Ad	bronchial
16	chr15:92936600-92938600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr15:92936600-92938600	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
18	chr15:92936600-92938600	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
19	chr15:92936600-92938600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr15:92936600-92938600	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr15:92936600-92938600	Bivalent/Poised TSS	Fetal Intestine Large	intestine
22	chr15:92936600-92938800	Active TSS	Fetal Brain Female	brain
23	chr15:92936600-92939400	Active TSS	HSMMtube	muscle
24	chr15:92936800-92938400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
25	chr15:92936800-92938400	Active TSS	Left Ventricle	heart
26	chr15:92936800-92938400	Bivalent Enhancer	Lung	lung
27	chr15:92936800-92938400	Active TSS	NH-A	brain
28	chr15:92936800-92938600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
29	chr15:92936800-92938600	Active TSS	H9 Cell Line	embryonic stem cell
30	chr15:92936800-92938600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
31	chr15:92936800-92938600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
32	chr15:92936800-92938600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr15:92936800-92938600	Bivalent/Poised TSS	Fetal Intestine Small	intestine
34	chr15:92936800-92938600	Active TSS	Fetal Lung	lung
35	chr15:92936800-92938800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr15:92936800-92939200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
37	chr15:92937000-92938400	Bivalent/Poised TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chr15:92937000-92938400	Active TSS	Fetal Heart	heart
39	chr15:92937000-92938400	Active TSS	Psoas Muscle	Psoas
40	chr15:92937000-92938400	Bivalent/Poised TSS	Thymus	Thymus
41	chr15:92937000-92938400	Bivalent/Poised TSS	NHEK	skin
42	chr15:92937000-92938600	Bivalent/Poised TSS	Foreskin Melanocyte Primary Cells skin01	Skin
43	chr15:92937200-92938400	Bivalent/Poised TSS	Brain Germinal Matrix	brain
44	chr15:92937200-92938600	Flanking Bivalent TSS/Enh	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr15:92937400-92938400	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin03	Skin
46	chr15:92937400-92938400	Flanking Bivalent TSS/Enh	Duodenum Smooth Muscle	Duodenum
47	chr15:92937400-92938400	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
48	chr15:92937400-92938400	Bivalent Enhancer	Stomach Mucosa	stomach
49	chr15:92937400-92938600	Flanking Bivalent TSS/Enh	Cortex derived primary cultured neurospheres	brain
50	chr15:92937400-92938600	Weak transcription	Fetal Brain Male	brain

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