Variant report

Variant	rs718595
Chromosome Location	chr17:63280125-63280126
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs16962050	1.00[AMR][1000 genomes]
rs1981673	0.84[AFR][1000 genomes]
rs3919512	1.00[AMR][1000 genomes]
rs8071646	0.96[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv482610	chr17:63214370-63372334	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:63274600-63282800	Weak transcription	NH-A	brain
2	chr17:63279200-63280600	Enhancers	Stomach Mucosa	stomach
3	chr17:63279400-63280600	Enhancers	Rectal Mucosa Donor 31	rectum
4	chr17:63279400-63280600	Enhancers	HUVEC	blood vessel
5	chr17:63279400-63280800	Enhancers	Rectal Mucosa Donor 29	rectum
6	chr17:63279600-63286800	Weak transcription	Right Atrium	heart
7	chr17:63279800-63280400	Enhancers	Muscle Satellite Cultured Cells	--
8	chr17:63279800-63280400	Enhancers	Osteobl	bone
9	chr17:63280000-63280200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr17:63280000-63280200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr17:63280000-63280600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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