Variant report

Variant	rs720864
Chromosome Location	chr8:64431251-64431252
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11774825	0.83[CHB][hapmap];0.91[JPT][hapmap]
rs11985469	1.00[CHB][hapmap];0.91[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.90[MEX][hapmap];0.87[MKK][hapmap];0.95[ASN][1000 genomes]
rs12334697	0.90[CHB][hapmap]
rs1367813	0.97[ASN][1000 genomes]
rs16930513	0.97[ASN][1000 genomes]
rs2060103	0.90[CHB][hapmap]
rs28666830	0.97[ASN][1000 genomes]
rs28821539	0.86[EUR][1000 genomes]
rs891693	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890967	chr8:64107847-64454446	Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64429200-64431400	Weak transcription	Fetal Brain Female	brain
2	chr8:64430200-64438600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr8:64431000-64433200	Enhancers	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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