The 2.0 version of rSNPBase

Variant report

Variant rs7219107
Chromosome Location chr17:45968591-45968592
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:45960000-45971800 Weak transcription Rectal Smooth Muscle rectum
2 chr17:45960000-45972200 Weak transcription HUVEC blood vessel
3 chr17:45960400-45972000 Weak transcription Colon Smooth Muscle Colon
4 chr17:45962200-45970800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr17:45962200-45971800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr17:45962600-45971200 Weak transcription Gastric stomach
7 chr17:45963000-45971800 Weak transcription Fetal Lung lung
8 chr17:45963200-45969200 Weak transcription Stomach Mucosa stomach
9 chr17:45963200-45971400 Weak transcription Primary hematopoietic stem cells blood
10 chr17:45963200-45971400 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr17:45963400-45971400 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr17:45963400-45971800 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr17:45963400-45971800 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr17:45963400-45971800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr17:45963400-45972000 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr17:45963400-45972200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr17:45963400-45972600 Weak transcription Placenta Amnion Placenta Amnion
18 chr17:45963600-45970800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr17:45963600-45971600 Weak transcription Fetal Muscle Leg muscle
20 chr17:45963600-45971800 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr17:45963600-45972000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr17:45963600-45972000 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr17:45963600-45972200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr17:45963600-45972400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr17:45964200-45971200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr17:45964400-45971800 Weak transcription Duodenum Mucosa Duodenum
27 chr17:45964400-45971800 Weak transcription Fetal Intestine Large intestine
28 chr17:45964600-45971600 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr17:45965800-45971800 Weak transcription Brain Angular Gyrus brain
30 chr17:45966000-45972000 Weak transcription HSMM muscle
31 chr17:45966400-45971000 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr17:45966400-45971800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr17:45966800-45971800 Weak transcription A549 lung
34 chr17:45967400-45971600 Weak transcription Brain Cingulate Gyrus brain
35 chr17:45967400-45971800 Weak transcription Fetal Intestine Small intestine
36 chr17:45967400-45972000 Weak transcription Stomach Smooth Muscle stomach
37 chr17:45967600-45968600 Enhancers Primary neutrophils fromperipheralblood blood
38 chr17:45967600-45969600 Enhancers Monocytes-CD14+_RO01746 blood
39 chr17:45967600-45971400 Weak transcription Placenta Placenta
40 chr17:45967600-45971600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr17:45967600-45971600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr17:45967600-45971800 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr17:45967600-45971800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr17:45967600-45972000 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr17:45967600-45972000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr17:45967800-45968800 Weak transcription Primary B cells from peripheral blood blood
47 chr17:45967800-45969200 Weak transcription Fetal Thymus thymus
48 chr17:45967800-45969400 Enhancers Primary monocytes fromperipheralblood blood
49 chr17:45967800-45971200 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr17:45967800-45971200 Weak transcription K562 blood

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Last update: Aug 31, 2015