Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10854377	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12483065	0.82[EUR][1000 genomes]
rs13047829	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1474513	0.82[EUR][1000 genomes]
rs1474514	0.82[EUR][1000 genomes]
rs2142237	0.82[EUR][1000 genomes]
rs2823211	0.82[EUR][1000 genomes]
rs2823214	0.82[EUR][1000 genomes]
rs2823215	0.82[EUR][1000 genomes]
rs2823216	0.84[EUR][1000 genomes]
rs2823217	0.86[EUR][1000 genomes]
rs2823219	0.88[EUR][1000 genomes]
rs2823221	0.88[EUR][1000 genomes]
rs2823224	0.94[EUR][1000 genomes]
rs2823225	0.94[EUR][1000 genomes]
rs2823226	0.94[EUR][1000 genomes]
rs2823227	0.94[EUR][1000 genomes]
rs2823228	0.94[EUR][1000 genomes]
rs2823229	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4816536	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7279678	0.91[ASN][1000 genomes]
rs926133	0.87[EUR][1000 genomes]
rs982774	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1063385	chr21:16521617-16926212	Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv1056659	chr21:16646531-16709391	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv1064280	chr21:16664312-17049272	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16682800-16687400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr21:16682800-16687600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr21:16684800-16685600	Enhancers	Placenta	Placenta
4	chr21:16685000-16688000	Weak transcription	Primary hematopoietic stem cells	blood

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