Variant report
Variant | rs7231912 |
---|---|
Chromosome Location | chr18:24936198-24936199 |
allele | A/C/G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:3)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
(count:3 , 50 per page) page:
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No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | RAD21 | chr18:24936036-24936263 | H1-hESC | embryonic stem cell: | n/a | chr18:24936176-24936188 chr18:24936125-24936139 |
2 | CTCF | chr18:24936137-24936209 | H1-hESC | embryonic stem cell: | n/a | n/a |
3 | POLR2A | chr18:24936154-24936225 | MCF-7 | breast: | n/a | n/a |
No data |
No data |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
UBA52P9 | TF binding region |
rs_ID | r2[population] |
---|---|
rs7506170 | 1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv3331699 | chr18:24864438-25095929 | Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats | TF binding regionChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
2 | esv2761996 | chr18:24866083-25818618 | Flanking Active TSS Enhancers Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 12 gene(s) | inside rSNPs | diseases |
3 | nsv833601 | chr18:24908240-25080975 | Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS | TF binding regionChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
No data |