The 2.0 version of rSNPBase

Variant report

Variant rs72447144
Chromosome Location chr10:89505874-89505875
allele -/A/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:89460400-89512000 Weak transcription HSMM muscle
2 chr10:89463000-89541400 Weak transcription Rectal Smooth Muscle rectum
3 chr10:89473000-89577200 Weak transcription Gastric stomach
4 chr10:89476200-89542400 Weak transcription Pancreas Pancrea
5 chr10:89490800-89511400 Weak transcription Primary B cells from cord blood blood
6 chr10:89495000-89512200 Weak transcription Colon Smooth Muscle Colon
7 chr10:89495000-89514000 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr10:89495000-89541400 Weak transcription Right Ventricle heart
9 chr10:89495000-89576400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr10:89495200-89509000 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr10:89495200-89509000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr10:89495200-89509600 Weak transcription H1 Cell Line embryonic stem cell
13 chr10:89495200-89511800 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr10:89495200-89514000 Weak transcription Fetal Muscle Leg muscle
15 chr10:89495200-89515600 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr10:89495200-89530600 Weak transcription Brain Cingulate Gyrus brain
17 chr10:89495200-89542600 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr10:89495200-89544600 Weak transcription Brain Substantia Nigra brain
19 chr10:89495200-89559200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr10:89495200-89577400 Weak transcription Spleen Spleen
21 chr10:89495400-89525600 Weak transcription Brain Hippocampus Middle brain
22 chr10:89495600-89513000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr10:89498200-89519400 Weak transcription Stomach Smooth Muscle stomach
24 chr10:89498200-89541400 Weak transcription Aorta Aorta
25 chr10:89498800-89536200 Weak transcription Small Intestine intestine
26 chr10:89499800-89511200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr10:89500600-89511800 Weak transcription HMEC breast
28 chr10:89500600-89513000 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr10:89501000-89506200 Strong transcription Fetal Intestine Small intestine
30 chr10:89501000-89507000 Strong transcription Osteobl bone
31 chr10:89501000-89509600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr10:89501000-89511600 Weak transcription Hela-S3 cervix
33 chr10:89501400-89508800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr10:89501600-89507000 Strong transcription Rectal Mucosa Donor 31 rectum
35 chr10:89502000-89508600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr10:89502200-89507000 Strong transcription NHLF lung
37 chr10:89502400-89506800 Strong transcription Ovary ovary
38 chr10:89502400-89507400 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr10:89502600-89506800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr10:89502600-89507000 Strong transcription Lung lung
41 chr10:89502600-89508400 Strong transcription HUVEC blood vessel
42 chr10:89502800-89506800 Strong transcription Adipose Nuclei Adipose
43 chr10:89502800-89511000 Strong transcription Liver Liver
44 chr10:89503000-89506400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr10:89503000-89507000 Strong transcription NH-A brain
46 chr10:89503200-89507000 Strong transcription Sigmoid Colon Sigmoid Colon
47 chr10:89503200-89521200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr10:89503400-89508400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr10:89503400-89523200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr10:89503400-89528400 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015