Variant report

Variant rs7245561
Chromosome Location chr19:23927345-23927346
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23922200-23933600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr19:23923000-23940600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr19:23924000-23929800 Weak transcription Rectal Smooth Muscle rectum
4 chr19:23924200-23930000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
5 chr19:23924200-23939600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr19:23924600-23927400 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr19:23924600-23933600 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
8 chr19:23924600-23941000 Weak transcription Pancreas Pancrea
9 chr19:23925200-23928200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr19:23925400-23927400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr19:23925400-23928000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr19:23925400-23929200 Weak transcription Colon Smooth Muscle Colon
13 chr19:23925400-23933000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
14 chr19:23925600-23928400 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr19:23925600-23930000 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
16 chr19:23925800-23928000 Weak transcription Fetal Thymus thymus
17 chr19:23925800-23930200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr19:23925800-23930400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
19 chr19:23926000-23928200 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
20 chr19:23926000-23930000 ZNF genes & repeats Liver Liver
21 chr19:23926000-23930000 ZNF genes & repeats Fetal Lung lung
22 chr19:23926000-23933600 ZNF genes & repeats Dnd41 blood
23 chr19:23926200-23927600 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
24 chr19:23926200-23929800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr19:23926200-23929800 ZNF genes & repeats Fetal Brain Female brain
26 chr19:23926200-23932600 ZNF genes & repeats Primary B cells from peripheral blood blood
27 chr19:23926400-23928200 ZNF genes & repeats Duodenum Mucosa Duodenum
28 chr19:23926400-23928200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
29 chr19:23926400-23930000 ZNF genes & repeats Primary hematopoietic stem cells blood
30 chr19:23926400-23930000 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr19:23926400-23930000 ZNF genes & repeats Adipose Nuclei Adipose
32 chr19:23926600-23928200 ZNF genes & repeats Brain Inferior Temporal Lobe brain
33 chr19:23926600-23928400 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
34 chr19:23926600-23930000 ZNF genes & repeats H1 Cell Line embryonic stem cell
35 chr19:23926600-23930000 ZNF genes & repeats Primary B cells from cord blood blood
36 chr19:23926600-23930000 ZNF genes & repeats Primary T cells from cord blood blood
37 chr19:23926600-23930000 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
38 chr19:23926600-23930200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr19:23926800-23927600 ZNF genes & repeats Brain Anterior Caudate brain
40 chr19:23926800-23927800 ZNF genes & repeats Brain Substantia Nigra brain
41 chr19:23926800-23927800 ZNF genes & repeats Fetal Brain Male brain
42 chr19:23926800-23928200 ZNF genes & repeats Primary T cells effector/memory enriched fromperipheralblood blood
43 chr19:23926800-23929000 Weak transcription Left Ventricle heart
44 chr19:23926800-23929400 Weak transcription Aorta Aorta
45 chr19:23926800-23929800 ZNF genes & repeats Brain Germinal Matrix brain
46 chr19:23926800-23930000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
47 chr19:23926800-23930200 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr19:23927000-23927400 ZNF genes & repeats Stomach Smooth Muscle stomach
49 chr19:23927000-23927600 ZNF genes & repeats Brain Hippocampus Middle brain
50 chr19:23927000-23927600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet

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