The 2.0 version of rSNPBase

Variant report

Variant rs72472307
Chromosome Location chr1:220972834-220972835
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220961000-220973400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:220961000-220976800 Weak transcription Ovary ovary
3 chr1:220961000-220978200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:220961000-220982200 Weak transcription Brain Substantia Nigra brain
5 chr1:220961400-220983800 Weak transcription Esophagus oesophagus
6 chr1:220961600-220975000 Weak transcription Brain Angular Gyrus brain
7 chr1:220961600-220975200 Weak transcription Brain Cingulate Gyrus brain
8 chr1:220961600-220983600 Weak transcription Pancreas Pancrea
9 chr1:220961800-220974200 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr1:220961800-220979800 Weak transcription Right Atrium heart
11 chr1:220961800-220981400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr1:220961800-220981600 Weak transcription Fetal Muscle Trunk muscle
13 chr1:220961800-220983800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr1:220962000-220975000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:220964000-220974000 Weak transcription H9 Cell Line embryonic stem cell
16 chr1:220964800-220978400 Weak transcription Primary B cells from cord blood blood
17 chr1:220965000-220980000 Weak transcription Fetal Muscle Leg muscle
18 chr1:220965200-220979600 Weak transcription Gastric stomach
19 chr1:220965200-220985400 Weak transcription Aorta Aorta
20 chr1:220965400-220982200 Weak transcription Brain Inferior Temporal Lobe brain
21 chr1:220965600-220983600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:220965800-220983800 Weak transcription Fetal Lung lung
23 chr1:220966400-220996000 Strong transcription Monocytes-CD14+_RO01746 blood
24 chr1:220966600-220982400 Strong transcription Primary monocytes fromperipheralblood blood
25 chr1:220966800-220985200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr1:220967600-220976400 Strong transcription Adipose Nuclei Adipose
27 chr1:220967600-220983800 Weak transcription Psoas Muscle Psoas
28 chr1:220968200-220977200 Strong transcription Primary neutrophils fromperipheralblood blood
29 chr1:220969600-220975600 Strong transcription HUES48 Cell Line embryonic stem cell
30 chr1:220969600-220978800 Strong transcription HepG2 liver
31 chr1:220969800-220974200 Strong transcription HUES64 Cell Line embryonic stem cell
32 chr1:220969800-220976400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr1:220969800-220976600 Strong transcription iPS-20b Cell Line embryonic stem cell
34 chr1:220970000-220975600 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr1:220970000-220975600 Strong transcription Fetal Intestine Large intestine
36 chr1:220970000-220976000 Strong transcription Fetal Stomach stomach
37 chr1:220970400-220973000 Weak transcription Lung lung
38 chr1:220970400-220981600 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr1:220970400-220985800 Weak transcription Duodenum Mucosa Duodenum
40 chr1:220970600-220974200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr1:220970600-220974400 Strong transcription H1 Cell Line embryonic stem cell
42 chr1:220970600-220975200 Strong transcription Liver Liver
43 chr1:220970600-220976400 Strong transcription Fetal Brain Female brain
44 chr1:220970800-220981600 Weak transcription Brain Hippocampus Middle brain
45 chr1:220971000-220973400 Enhancers Placenta Placenta
46 chr1:220971000-220975600 Strong transcription HUES6 Cell Line embryonic stem cell
47 chr1:220971000-220976400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr1:220971200-220973200 Strong transcription Duodenum Smooth Muscle Duodenum
49 chr1:220971200-220973800 Strong transcription Stomach Smooth Muscle stomach
50 chr1:220971200-220976400 Strong transcription Spleen Spleen

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Last update: Aug 31, 2015