The 2.0 version of rSNPBase

Variant report

Variant rs7249692
Chromosome Location chr19:19670688-19670689
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19643600-19675400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr19:19652000-19688400 Weak transcription Right Atrium heart
3 chr19:19652200-19680000 Weak transcription Placenta Amnion Placenta Amnion
4 chr19:19652600-19686200 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr19:19659200-19686200 Weak transcription Fetal Brain Male brain
6 chr19:19661200-19670800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr19:19661400-19675600 Weak transcription Ovary ovary
8 chr19:19661400-19677800 Weak transcription Fetal Lung lung
9 chr19:19661600-19673400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr19:19661800-19673400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr19:19663400-19670800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr19:19665600-19672600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr19:19665600-19677200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr19:19665600-19682400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr19:19665600-19685600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr19:19665800-19670800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr19:19665800-19672600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr19:19666400-19672800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr19:19666600-19679600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr19:19666800-19681000 Weak transcription Pancreas Pancrea
21 chr19:19667600-19679600 Weak transcription Brain Cingulate Gyrus brain
22 chr19:19667800-19670800 Weak transcription Brain Germinal Matrix brain
23 chr19:19668200-19675600 Weak transcription Fetal Muscle Trunk muscle
24 chr19:19668600-19673200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr19:19669200-19679600 Weak transcription NHDF-Ad bronchial
26 chr19:19669400-19675400 Weak transcription GM12878-XiMat blood
27 chr19:19669400-19683200 Strong transcription Fetal Stomach stomach
28 chr19:19669400-19683600 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr19:19669600-19670800 Enhancers Primary T helper naive cells fromperipheralblood blood
30 chr19:19669600-19670800 Weak transcription Spleen Spleen
31 chr19:19669600-19671200 Strong transcription Breast Myoepithelial Primary Cells Breast
32 chr19:19669600-19679600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr19:19669600-19680200 Weak transcription Fetal Intestine Small intestine
34 chr19:19669600-19680800 Weak transcription Gastric stomach
35 chr19:19669800-19672200 Weak transcription Thymus Thymus
36 chr19:19670000-19670800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr19:19670000-19670800 Enhancers Primary T cells from cord blood blood
38 chr19:19670000-19671000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr19:19670000-19671600 Enhancers Primary T helper naive cells from peripheral blood blood
40 chr19:19670000-19671600 Enhancers Primary T helper cells PMA-I stimulated --
41 chr19:19670000-19672800 Weak transcription Fetal Brain Female brain
42 chr19:19670200-19672400 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr19:19670400-19671000 Enhancers Primary T helper cells fromperipheralblood blood
44 chr19:19670400-19671400 Enhancers Primary T cells fromperipheralblood blood
45 chr19:19670400-19671600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
46 chr19:19670600-19670800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr19:19670600-19671400 Enhancers Primary hematopoietic stem cells short term culture blood
48 chr19:19670600-19671400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
49 chr19:19670600-19671400 Enhancers Primary T regulatory cells fromperipheralblood blood
50 chr19:19670600-19671400 Enhancers Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015