The 2.0 version of rSNPBase

Variant report

Variant rs7256626
Chromosome Location chr19:38545238-38545239
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38521800-38548600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr19:38522000-38553600 Weak transcription Stomach Smooth Muscle stomach
3 chr19:38526800-38545600 Weak transcription Stomach Mucosa stomach
4 chr19:38527800-38548800 Weak transcription Right Atrium heart
5 chr19:38527800-38551800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr19:38528200-38573200 Weak transcription Left Ventricle heart
7 chr19:38529000-38548600 Weak transcription Pancreas Pancrea
8 chr19:38531400-38550800 Weak transcription NHLF lung
9 chr19:38534800-38545400 Weak transcription H9 Cell Line embryonic stem cell
10 chr19:38537800-38545400 Weak transcription Fetal Stomach stomach
11 chr19:38537800-38548800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr19:38537800-38548800 Weak transcription Esophagus oesophagus
13 chr19:38538000-38548800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr19:38538400-38552800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr19:38539000-38545400 Weak transcription Gastric stomach
16 chr19:38539000-38572000 Weak transcription Right Ventricle heart
17 chr19:38539200-38545400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr19:38539200-38545400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr19:38539200-38548800 Weak transcription Colonic Mucosa Colon
20 chr19:38539200-38548800 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr19:38539200-38591200 Weak transcription Small Intestine intestine
22 chr19:38539600-38545400 Weak transcription HSMM muscle
23 chr19:38540200-38545400 Weak transcription Fetal Lung lung
24 chr19:38540200-38545400 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr19:38540200-38545400 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr19:38540200-38548600 Weak transcription Muscle Satellite Cultured Cells --
27 chr19:38540400-38551600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr19:38540600-38545400 Weak transcription Lung lung
29 chr19:38540600-38545400 Weak transcription Thymus Thymus
30 chr19:38540600-38545400 Weak transcription Spleen Spleen
31 chr19:38540600-38545400 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr19:38540600-38545600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr19:38540600-38548800 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr19:38540600-38549000 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr19:38540800-38545400 Weak transcription Primary monocytes fromperipheralblood blood
36 chr19:38540800-38545600 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr19:38540800-38548800 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr19:38540800-38549800 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr19:38541000-38548600 Weak transcription Primary T cells from cord blood blood
40 chr19:38541200-38546200 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr19:38541400-38548600 Weak transcription GM12878-XiMat blood
42 chr19:38543200-38546600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr19:38543400-38545400 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr19:38543400-38545600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr19:38543400-38553600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr19:38543800-38545400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr19:38543800-38545400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr19:38543800-38545400 Weak transcription Duodenum Mucosa Duodenum
49 chr19:38543800-38549000 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr19:38543800-38563200 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015