Variant report

Variant	rs72591364
Chromosome Location	chr8:120302576-120302577
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10243874	0.83[ASN][1000 genomes]
rs10268455	0.85[ASN][1000 genomes]
rs10268616	0.85[ASN][1000 genomes]
rs10271810	0.85[ASN][1000 genomes]
rs12171593	0.85[ASN][1000 genomes]
rs1528677	0.85[ASN][1000 genomes]
rs1528678	0.85[ASN][1000 genomes]
rs1528679	0.85[ASN][1000 genomes]
rs28377653	0.80[ASN][1000 genomes]
rs28550969	0.82[ASN][1000 genomes]
rs6971014	0.85[ASN][1000 genomes]
rs72591346	1.00[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs72591348	1.00[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs72591349	1.00[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs72591356	1.00[ASN][1000 genomes]
rs72591359	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72591361	0.82[ASN][1000 genomes]
rs9942632	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv868916	chr8:119911943-120762250	Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
2	nsv1026655	chr8:120282929-120522329	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
3	nsv891416	chr8:120295792-120353062	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region miRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:120291200-120302800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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