Variant report

Variant rs7260260
Chromosome Location chr19:53742898-53742899
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53728200-53748800 ZNF genes & repeats Liver Liver
2 chr19:53733600-53755200 ZNF genes & repeats Adipose Nuclei Adipose
3 chr19:53733600-53755800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
4 chr19:53735800-53756200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr19:53736200-53749000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
6 chr19:53737400-53757600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr19:53737800-53743000 Weak transcription Pancreas Pancrea
8 chr19:53738000-53743000 Weak transcription Fetal Stomach stomach
9 chr19:53738600-53749000 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr19:53738800-53756600 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
11 chr19:53739400-53743400 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
12 chr19:53739400-53755200 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr19:53739600-53748600 ZNF genes & repeats Brain Anterior Caudate brain
14 chr19:53739600-53748600 ZNF genes & repeats Brain Germinal Matrix brain
15 chr19:53739600-53756200 ZNF genes & repeats Fetal Brain Female brain
16 chr19:53740000-53747200 ZNF genes & repeats Brain Substantia Nigra brain
17 chr19:53740000-53749800 ZNF genes & repeats Duodenum Mucosa Duodenum
18 chr19:53740000-53750600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
19 chr19:53740000-53756400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
20 chr19:53740000-53756600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
21 chr19:53740000-53756800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr19:53740200-53748800 ZNF genes & repeats H1 Cell Line embryonic stem cell
23 chr19:53740200-53748800 ZNF genes & repeats Primary B cells from cord blood blood
24 chr19:53740200-53749000 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
25 chr19:53740200-53749000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
26 chr19:53740200-53749000 ZNF genes & repeats Colon Smooth Muscle Colon
27 chr19:53740200-53750600 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
28 chr19:53740200-53752600 ZNF genes & repeats Brain Hippocampus Middle brain
29 chr19:53740200-53756800 ZNF genes & repeats Fetal Lung lung
30 chr19:53740200-53757600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr19:53740400-53743400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
32 chr19:53740400-53743400 ZNF genes & repeats Skeletal Muscle Male skeletal muscle
33 chr19:53740400-53745000 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
34 chr19:53740400-53747400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr19:53740400-53747800 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
36 chr19:53740400-53747800 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
37 chr19:53740400-53748600 ZNF genes & repeats Stomach Smooth Muscle stomach
38 chr19:53740400-53748800 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr19:53740400-53749000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
40 chr19:53740400-53749000 ZNF genes & repeats Primary T cells from cord blood blood
41 chr19:53740400-53749000 ZNF genes & repeats Brain Cingulate Gyrus brain
42 chr19:53740400-53749000 ZNF genes & repeats Dnd41 blood
43 chr19:53740400-53756800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
44 chr19:53740600-53743000 Strong transcription Placenta Placenta
45 chr19:53740600-53743400 ZNF genes & repeats Rectal Smooth Muscle rectum
46 chr19:53740600-53743400 ZNF genes & repeats NHDF-Ad bronchial
47 chr19:53740600-53747600 ZNF genes & repeats Brain Dorsolateral Prefrontal Cortex brain
48 chr19:53740600-53747800 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
49 chr19:53740600-53748000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
50 chr19:53740600-53750600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood

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