Variant report

Variant	rs7260377
Chromosome Location	chr19:51129051-51129052
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1060760	chr19:50883425-51463712	ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
2	nsv1058177	chr19:50984774-51463712	Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	84 gene(s)	inside rSNPs	diseases
3	nsv1062281	chr19:51053340-51230844	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Enhancers Bivalent Enhancer Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
4	nsv1062548	chr19:51081358-51230844	Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
5	nsv1065222	chr19:51084705-51136844	Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
6	nsv961235	chr19:51128736-51131477	Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island	1 gene(s)	inside rSNPs	n/a
7	esv1959087	chr19:51128835-51129274	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a
8	esv3523938	chr19:51128904-51129188	Weak transcription Bivalent Enhancer Enhancers	n/a	n/a	inside rSNPs	n/a
9	esv3523937	chr19:51128935-51129117	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	inside rSNPs	n/a
10	esv3523939	chr19:51128991-51129117	Bivalent Enhancer Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
11	esv1000559	chr19:51128993-51129066	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a
12	esv1394478	chr19:51129042-51129116	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:51126400-51137400	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr19:51127400-51129400	Weak transcription	Brain Hippocampus Middle	brain
3	chr19:51128600-51130200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr19:51128800-51129400	Enhancers	Fetal Muscle Leg	muscle
5	chr19:51129000-51129200	Bivalent Enhancer	Fetal Muscle Trunk	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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