Variant report

Variant	rs7265233
Chromosome Location	chr20:22348556-22348557
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs8125794	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833942	chr20:22283122-22440749	Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv437838	chr20:22323038-22357152	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv585720	chr20:22333108-22376421	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:22334800-22354000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr20:22348200-22349400	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr20:22348200-22350400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr20:22348200-22353600	Enhancers	Primary hematopoietic stem cells short term culture	blood
5	chr20:22348400-22348600	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr20:22348400-22349800	Enhancers	Monocytes-CD14+_RO01746	blood
7	chr20:22348400-22352200	Enhancers	Primary B cells from cord blood	blood
8	chr20:22348400-22352400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr20:22348400-22354800	Enhancers	Primary B cells from peripheral blood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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