The 2.0 version of rSNPBase

Variant report

Variant rs72664871
Chromosome Location chr1:61677853-61677854
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:61664600-61678400 Weak transcription Fetal Muscle Trunk muscle
2 chr1:61664800-61679200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr1:61665000-61683800 Weak transcription Brain Germinal Matrix brain
4 chr1:61669200-61681400 Weak transcription Stomach Smooth Muscle stomach
5 chr1:61669200-61685800 Weak transcription Fetal Brain Female brain
6 chr1:61669200-61692400 Weak transcription Fetal Muscle Leg muscle
7 chr1:61669400-61678400 Weak transcription NHEK skin
8 chr1:61669400-61679400 Weak transcription Pancreas Pancrea
9 chr1:61669400-61683800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr1:61669400-61691800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr1:61669600-61685800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr1:61669600-61686000 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:61669600-61692400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:61669800-61678400 Weak transcription Adipose Nuclei Adipose
15 chr1:61670400-61681400 Weak transcription Ovary ovary
16 chr1:61670800-61680400 Weak transcription Fetal Intestine Small intestine
17 chr1:61671200-61683200 Weak transcription K562 blood
18 chr1:61674000-61678400 Weak transcription Left Ventricle heart
19 chr1:61674000-61679200 Weak transcription HepG2 liver
20 chr1:61674200-61686200 Weak transcription Brain Cingulate Gyrus brain
21 chr1:61674400-61679800 Weak transcription Fetal Lung lung
22 chr1:61674800-61678200 Weak transcription Liver Liver
23 chr1:61674800-61678400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr1:61674800-61683800 Weak transcription Psoas Muscle Psoas
25 chr1:61674800-61685000 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr1:61676400-61680600 Weak transcription A549 lung
27 chr1:61676600-61678400 Weak transcription Aorta Aorta
28 chr1:61676600-61678400 Weak transcription Brain Anterior Caudate brain
29 chr1:61676600-61678400 Weak transcription Brain Substantia Nigra brain
30 chr1:61676600-61685800 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr1:61676600-61690000 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr1:61676800-61679800 Weak transcription Brain Hippocampus Middle brain
33 chr1:61676800-61681400 Weak transcription Colon Smooth Muscle Colon
34 chr1:61676800-61681400 Weak transcription Rectal Smooth Muscle rectum
35 chr1:61676800-61681400 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr1:61677000-61678400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr1:61677000-61678400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:61677000-61678400 Weak transcription Fetal Brain Male brain
39 chr1:61677000-61681400 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr1:61677600-61678600 Weak transcription Right Atrium heart
41 chr1:61677600-61692400 Weak transcription Esophagus oesophagus
42 chr1:61677800-61685600 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015