Variant report

Variant	rs72669450
Chromosome Location	chr1:67094288-67094289
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs72669468	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869413	chr1:67082512-67414286	Weak transcription Strong transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:67071600-67094800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr1:67084200-67099800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr1:67088400-67114200	Weak transcription	Duodenum Smooth Muscle	Duodenum
4	chr1:67090400-67155000	Weak transcription	Fetal Heart	heart
5	chr1:67090800-67094600	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr1:67090800-67099600	Weak transcription	Brain Cingulate Gyrus	brain
7	chr1:67090800-67108400	Weak transcription	Brain Anterior Caudate	brain
8	chr1:67091000-67099000	Weak transcription	Brain Hippocampus Middle	brain
9	chr1:67091200-67100800	Weak transcription	Brain Angular Gyrus	brain
10	chr1:67091200-67100800	Weak transcription	NHLF	lung
11	chr1:67091200-67107400	Weak transcription	NHDF-Ad	bronchial
12	chr1:67091200-67108600	Weak transcription	Osteobl	bone
13	chr1:67091200-67108800	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr1:67091200-67128000	Weak transcription	NH-A	brain
15	chr1:67091400-67098200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr1:67091400-67105200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
17	chr1:67091400-67107400	Weak transcription	Fetal Brain Female	brain
18	chr1:67092000-67117200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr1:67092200-67099800	Weak transcription	Psoas Muscle	Psoas
20	chr1:67092200-67114200	Weak transcription	Primary hematopoietic stem cells	blood
21	chr1:67092600-67095400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr1:67093200-67095400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr1:67093200-67096200	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr1:67093200-67099000	Weak transcription	Brain Inferior Temporal Lobe	brain
25	chr1:67093200-67100800	Weak transcription	Aorta	Aorta
26	chr1:67093200-67107800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr1:67094000-67095200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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