Variant report

Variant rs72669509
Chromosome Location chr1:63190163-63190164
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63187000-63190200 Weak transcription iPS-20b Cell Line embryonic stem cell
2 chr1:63187000-63191000 Weak transcription HUES6 Cell Line embryonic stem cell
3 chr1:63187200-63190200 Enhancers Primary monocytes fromperipheralblood blood
4 chr1:63187200-63190800 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr1:63187200-63191000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr1:63187200-63191800 Weak transcription K562 blood
7 chr1:63187200-63195200 Weak transcription Fetal Stomach stomach
8 chr1:63187400-63190200 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr1:63187400-63190200 Weak transcription Stomach Mucosa stomach
10 chr1:63187400-63190400 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr1:63187400-63190600 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr1:63187400-63190800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr1:63187400-63191000 Weak transcription Fetal Intestine Small intestine
14 chr1:63187400-63191200 Weak transcription Duodenum Mucosa Duodenum
15 chr1:63187400-63198000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:63188000-63190600 Weak transcription Small Intestine intestine
17 chr1:63188200-63190600 Weak transcription Fetal Heart heart
18 chr1:63188200-63191000 Enhancers GM12878-XiMat blood
19 chr1:63188200-63191600 Weak transcription Fetal Intestine Large intestine
20 chr1:63188600-63194200 Enhancers Cortex derived primary cultured neurospheres brain
21 chr1:63189000-63191000 Weak transcription HepG2 liver
22 chr1:63189200-63190600 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr1:63189200-63190800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:63189200-63190800 Enhancers Left Ventricle heart
25 chr1:63189200-63191000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:63189400-63190400 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr1:63189800-63190200 Enhancers Aorta Aorta
28 chr1:63189800-63190200 Enhancers Brain Cingulate Gyrus brain
29 chr1:63189800-63190200 Enhancers Brain Inferior Temporal Lobe brain
30 chr1:63189800-63190200 Enhancers NHLF lung
31 chr1:63189800-63190400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:63189800-63190600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
33 chr1:63189800-63190800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:63189800-63190800 Enhancers Brain Anterior Caudate brain
35 chr1:63189800-63190800 Enhancers Osteobl bone
36 chr1:63189800-63191000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:63189800-63191000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:63189800-63192000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:63189800-63192000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
40 chr1:63189800-63192000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr1:63189800-63192000 Enhancers Adipose Nuclei Adipose
42 chr1:63189800-63192000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
43 chr1:63189800-63192400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
44 chr1:63189800-63193800 Enhancers Rectal Mucosa Donor 31 rectum
45 chr1:63190000-63190200 Enhancers Right Atrium heart
46 chr1:63190000-63190400 Enhancers Brain Angular Gyrus brain
47 chr1:63190000-63190400 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr1:63190000-63190600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
49 chr1:63190000-63190800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:63190000-63190800 Flanking Active TSS NHDF-Ad bronchial

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