Variant report

Variant	rs72670426
Chromosome Location	chr4:121189782-121189783
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:121189633..121192348-chr4:121208319..121209845,2	K562	blood:
2	chr4:121185242..121187871-chr4:121188856..121190633,2	K562	blood:

Extended variants
information (count: 67 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:61)

rs_ID	r²[population]
rs10518357	0.97[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1526330	0.84[EUR][1000 genomes]
rs16997622	1.00[ASN][1000 genomes]
rs17009500	1.00[ASN][1000 genomes]
rs17011044	1.00[ASN][1000 genomes]
rs17012481	0.90[AFR][1000 genomes]
rs17012690	0.97[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17012694	0.97[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17012753	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17012817	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17012973	0.82[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17013102	0.84[AFR][1000 genomes]
rs17013117	0.83[AFR][1000 genomes]
rs34030022	1.00[ASN][1000 genomes]
rs57848599	0.85[AFR][1000 genomes]
rs6821789	0.94[EUR][1000 genomes]
rs6833927	0.88[EUR][1000 genomes]
rs72668814	0.88[EUR][1000 genomes]
rs72668820	0.88[EUR][1000 genomes]
rs72668821	0.88[EUR][1000 genomes]
rs72668822	0.86[EUR][1000 genomes]
rs72668824	0.88[EUR][1000 genomes]
rs72668829	0.88[EUR][1000 genomes]
rs72668830	0.88[EUR][1000 genomes]
rs72668831	0.88[EUR][1000 genomes]
rs72668832	0.88[EUR][1000 genomes]
rs72668835	0.88[EUR][1000 genomes]
rs72668836	0.88[EUR][1000 genomes]
rs72668838	0.88[EUR][1000 genomes]
rs72668839	0.88[EUR][1000 genomes]
rs72668840	0.88[EUR][1000 genomes]
rs72668859	0.88[EUR][1000 genomes]
rs72668868	0.83[EUR][1000 genomes]
rs72668872	0.88[EUR][1000 genomes]
rs72668874	0.82[EUR][1000 genomes]
rs72668875	0.88[EUR][1000 genomes]
rs72668898	0.92[EUR][1000 genomes]
rs72668899	0.92[EUR][1000 genomes]
rs72668902	0.92[EUR][1000 genomes]
rs72670409	0.94[EUR][1000 genomes]
rs72670410	0.94[EUR][1000 genomes]
rs72670412	0.94[EUR][1000 genomes]
rs72670414	0.94[EUR][1000 genomes]
rs72670415	0.94[EUR][1000 genomes]
rs72670416	0.94[EUR][1000 genomes]
rs72670420	0.94[EUR][1000 genomes]
rs72670421	0.94[EUR][1000 genomes]
rs72670425	0.94[EUR][1000 genomes]
rs72670427	0.94[EUR][1000 genomes]
rs72670428	0.94[EUR][1000 genomes]
rs72670430	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72670431	0.94[EUR][1000 genomes]
rs72670444	0.94[EUR][1000 genomes]
rs72670447	0.94[EUR][1000 genomes]
rs72670460	0.80[EUR][1000 genomes]
rs72670461	0.80[EUR][1000 genomes]
rs72670464	0.80[EUR][1000 genomes]
rs72670466	0.80[EUR][1000 genomes]
rs72670477	0.80[EUR][1000 genomes]
rs7662162	0.84[EUR][1000 genomes]
rs7673609	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1007641	chr4:120884220-121555889	Strong transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
2	nsv537234	chr4:120884220-121555889	Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
3	nsv595333	chr4:121093248-121440368	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv1005240	chr4:121093285-121420997	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv879852	chr4:121108734-121768496	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
6	nsv1002606	chr4:121145456-121194713	Active TSS Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:121189600-121189800	Enhancers	Fetal Lung	lung

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