Variant report

Variant	rs72678165
Chromosome Location	chr8:119593980-119593981
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs72678171	1.00[AMR][1000 genomes]
rs72678172	1.00[AMR][1000 genomes]
rs72678174	1.00[AMR][1000 genomes]
rs72678175	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1032681	chr8:119153316-119609948	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv539737	chr8:119153316-119609948	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
3	nsv6362	chr8:119554736-119599269	Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:119580000-119595800	Weak transcription	Fetal Brain Male	brain
2	chr8:119580600-119596000	Weak transcription	Gastric	stomach
3	chr8:119585800-119602400	Weak transcription	Pancreas	Pancrea
4	chr8:119586000-119599200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr8:119587400-119599600	Weak transcription	Left Ventricle	heart
6	chr8:119589200-119598000	Weak transcription	Brain Angular Gyrus	brain
7	chr8:119590000-119598000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr8:119590400-119596600	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr8:119590600-119599200	Weak transcription	GM12878-XiMat	blood
10	chr8:119591200-119594400	Weak transcription	Primary B cells from peripheral blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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