Variant report

Variant	rs72682113
Chromosome Location	chr4:125670947-125670948
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs72682199	0.85[EUR][1000 genomes]
rs72682202	0.85[EUR][1000 genomes]
rs72683806	0.88[EUR][1000 genomes]
rs72683811	0.85[EUR][1000 genomes]
rs72683814	0.88[EUR][1000 genomes]
rs72683815	0.88[EUR][1000 genomes]
rs72683820	0.93[EUR][1000 genomes]
rs72683845	0.88[EUR][1000 genomes]
rs72683847	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879882	chr4:125662969-125703938	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:125668000-125672000	Weak transcription	Aorta	Aorta
2	chr4:125670000-125671000	Weak transcription	Fetal Lung	lung

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links