Variant report

Variant	rs7268884
Chromosome Location	chr20:22492200-22492201
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs73902814	0.96[EUR][1000 genomes]
rs73902817	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1066578	chr20:22472671-22513844	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats	Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:22489200-22492200	Enhancers	HepG2	liver
2	chr20:22489600-22492200	Weak transcription	Fetal Intestine Small	intestine
3	chr20:22490000-22496000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr20:22490200-22492600	Weak transcription	Pancreas	Pancrea
5	chr20:22491200-22492400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr20:22491800-22494400	Enhancers	Fetal Intestine Large	intestine
7	chr20:22492000-22492400	Bivalent Enhancer	Fetal Lung	lung
8	chr20:22492000-22492800	Enhancers	Liver	Liver
9	chr20:22492000-22493400	Enhancers	Rectal Mucosa Donor 31	rectum
10	chr20:22492200-22494200	Flanking Active TSS	HepG2	liver
11	chr20:22492200-22494400	Enhancers	Fetal Intestine Small	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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