Variant report

Variant	rs72715074
Chromosome Location	chr8:124850413-124850414
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:124845856..124848034-chr8:124848180..124850784,2	MCF-7	breast:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs16898680	1.00[AFR][1000 genomes]
rs35061659	1.00[AFR][1000 genomes]
rs55688638	1.00[AFR][1000 genomes]
rs72713125	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831451	chr8:124710946-124885148	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:67 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:124849400-124853400	Enhancers	Hela-S3	cervix
2	chr8:124849600-124852000	Enhancers	NH-A	brain
3	chr8:124850000-124850800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
4	chr8:124850000-124850800	Enhancers	Aorta	Aorta
5	chr8:124850000-124851000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr8:124850000-124851000	Flanking Active TSS	Muscle Satellite Cultured Cells	--
7	chr8:124850000-124853400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr8:124850200-124850600	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
9	chr8:124850200-124850600	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
10	chr8:124850200-124850600	Active TSS	Rectal Mucosa Donor 31	rectum
11	chr8:124850200-124850600	Flanking Active TSS	NHLF	lung
12	chr8:124850200-124850800	Active TSS	Primary monocytes fromperipheralblood	blood
13	chr8:124850200-124850800	Enhancers	Primary B cells from peripheral blood	blood
14	chr8:124850200-124850800	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
15	chr8:124850200-124850800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
16	chr8:124850200-124850800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr8:124850200-124850800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr8:124850200-124850800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr8:124850200-124850800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr8:124850200-124850800	Active TSS	Colonic Mucosa	Colon
21	chr8:124850200-124850800	Flanking Active TSS	Duodenum Mucosa	Duodenum
22	chr8:124850200-124850800	Flanking Active TSS	Fetal Lung	lung
23	chr8:124850200-124850800	Enhancers	Fetal Stomach	stomach
24	chr8:124850200-124850800	Active TSS	Rectal Smooth Muscle	rectum
25	chr8:124850200-124850800	Enhancers	Small Intestine	intestine
26	chr8:124850200-124850800	Flanking Active TSS	HSMMtube	muscle
27	chr8:124850200-124850800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
28	chr8:124850200-124850800	Flanking Active TSS	Osteobl	bone
29	chr8:124850200-124851000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr8:124850200-124851000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr8:124850200-124851000	Active TSS	Rectal Mucosa Donor 29	rectum
32	chr8:124850200-124851000	Flanking Active TSS	NHDF-Ad	bronchial
33	chr8:124850200-124852200	Weak transcription	HUVEC	blood vessel
34	chr8:124850400-124850600	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
35	chr8:124850400-124850600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
36	chr8:124850400-124850600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
37	chr8:124850400-124850600	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
38	chr8:124850400-124850600	Active TSS	Fetal Adrenal Gland	Adrenal Gland
39	chr8:124850400-124850600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
40	chr8:124850400-124850600	Active TSS	Stomach Mucosa	stomach
41	chr8:124850400-124850600	Active TSS	GM12878-XiMat	blood
42	chr8:124850400-124850600	Flanking Bivalent TSS/Enh	HepG2	liver
43	chr8:124850400-124850600	Flanking Active TSS	NHEK	skin
44	chr8:124850400-124850800	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
45	chr8:124850400-124850800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr8:124850400-124850800	Flanking Active TSS	Primary T cells fromperipheralblood	blood
47	chr8:124850400-124850800	Flanking Active TSS	Primary hematopoietic stem cells	blood
48	chr8:124850400-124850800	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
49	chr8:124850400-124850800	Active TSS	Primary T helper naive cells from peripheral blood	blood
50	chr8:124850400-124850800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood

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