Variant report

Variant	rs72722188
Chromosome Location	chr14:69807961-69807962
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:69805502..69808106-chr14:69810708..69812563,2	MCF-7	breast:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs28612284	1.00[ASN][1000 genomes]
rs45492497	1.00[ASN][1000 genomes]
rs4902701	1.00[ASN][1000 genomes]
rs55779567	1.00[ASN][1000 genomes]
rs7147076	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72723837	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs8009961	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456334	chr14:69793624-69831037	Strong transcription Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv564966	chr14:69793624-69831037	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69788800-69810400	Weak transcription	NHDF-Ad	bronchial
2	chr14:69791000-69817400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr14:69792200-69812000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr14:69793400-69818800	Weak transcription	Spleen	Spleen
5	chr14:69793400-69821200	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr14:69793400-69822600	Weak transcription	Brain Angular Gyrus	brain
7	chr14:69798200-69809400	Weak transcription	Pancreas	Pancrea
8	chr14:69800800-69815200	Weak transcription	Brain Germinal Matrix	brain
9	chr14:69800800-69821800	Weak transcription	Brain Hippocampus Middle	brain
10	chr14:69801200-69812000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr14:69803400-69809800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr14:69803400-69820800	Weak transcription	Esophagus	oesophagus
13	chr14:69804200-69809000	Strong transcription	Fetal Muscle Trunk	muscle
14	chr14:69804200-69812600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr14:69804600-69808600	Strong transcription	Right Ventricle	heart
16	chr14:69805200-69809600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr14:69806200-69818400	Weak transcription	Fetal Muscle Leg	muscle
18	chr14:69806400-69813600	Weak transcription	Fetal Intestine Small	intestine
19	chr14:69806600-69808000	Weak transcription	Brain Anterior Caudate	brain
20	chr14:69806600-69810000	Weak transcription	Cortex derived primary cultured neurospheres	brain
21	chr14:69806600-69814600	Weak transcription	Stomach Smooth Muscle	stomach
22	chr14:69806800-69809400	Weak transcription	Left Ventricle	heart
23	chr14:69806800-69809600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
24	chr14:69807000-69808200	Weak transcription	Fetal Brain Female	brain
25	chr14:69807000-69809200	Weak transcription	Brain Cingulate Gyrus	brain
26	chr14:69807000-69821000	Weak transcription	Fetal Intestine Large	intestine
27	chr14:69807800-69808600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr14:69807800-69808800	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain

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