Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:72942498..72946263-chr14:72947951..72951671,4	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10131497	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12050430	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12161899	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1544524	0.84[AMR][1000 genomes]
rs1548685	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17116363	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17780517	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2238177	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2238181	0.82[AMR][1000 genomes]
rs2239273	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2239274	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2239275	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2239276	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2283377	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3819549	0.82[AMR][1000 genomes]
rs55830079	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs55872112	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56134651	0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57380844	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7159382	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
2	nsv948800	chr14:72462557-73150701	Enhancers Bivalent Enhancer Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72944000-72957600	Weak transcription	Left Ventricle	heart
2	chr14:72948400-72953600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr14:72949200-72952000	Weak transcription	Stomach Smooth Muscle	stomach
4	chr14:72949400-72950800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr14:72949400-72962600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr14:72950000-72953400	Weak transcription	Adipose Nuclei	Adipose
7	chr14:72950200-72953200	Strong transcription	Cortex derived primary cultured neurospheres	brain

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