The 2.0 version of rSNPBase

Variant report

Variant rs7273017
Chromosome Location chr20:16453656-16453657
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:16410200-16455800 Weak transcription Duodenum Mucosa Duodenum
2 chr20:16410200-16473200 Weak transcription Primary T helper cells PMA-I stimulated --
3 chr20:16410600-16455400 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr20:16411200-16455200 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr20:16420800-16471400 Weak transcription Primary hematopoietic stem cells blood
6 chr20:16431400-16454600 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr20:16431400-16455400 Weak transcription Fetal Lung lung
8 chr20:16431400-16456000 Weak transcription Liver Liver
9 chr20:16431400-16463000 Weak transcription Aorta Aorta
10 chr20:16431400-16508200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr20:16431800-16458400 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr20:16431800-16462200 Weak transcription Primary T cells from cord blood blood
13 chr20:16433000-16456400 Weak transcription Primary B cells from cord blood blood
14 chr20:16436600-16464800 Weak transcription Small Intestine intestine
15 chr20:16440000-16455000 Weak transcription HSMM muscle
16 chr20:16440400-16454800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr20:16440400-16454800 Weak transcription Adipose Nuclei Adipose
18 chr20:16440400-16455400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr20:16440400-16468800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr20:16440600-16454600 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr20:16440600-16454800 Weak transcription Brain Hippocampus Middle brain
22 chr20:16440800-16454400 Weak transcription Colon Smooth Muscle Colon
23 chr20:16440800-16455400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr20:16440800-16456000 Weak transcription Rectal Smooth Muscle rectum
25 chr20:16441200-16454600 Weak transcription Fetal Muscle Leg muscle
26 chr20:16443600-16468600 Weak transcription Fetal Muscle Trunk muscle
27 chr20:16443800-16469600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr20:16443800-16469600 Weak transcription Lung lung
29 chr20:16444000-16466800 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr20:16446200-16455600 Weak transcription Fetal Intestine Large intestine
31 chr20:16446200-16455800 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr20:16446200-16455800 Weak transcription Fetal Intestine Small intestine
33 chr20:16448000-16483600 Weak transcription Pancreas Pancrea
34 chr20:16449400-16500600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr20:16449800-16455800 Weak transcription Brain Cingulate Gyrus brain
36 chr20:16450800-16455400 Weak transcription Fetal Kidney kidney
37 chr20:16451200-16488400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr20:16451400-16478600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr20:16453000-16456800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr20:16453000-16469600 Weak transcription Ovary ovary
41 chr20:16453200-16454600 Weak transcription HepG2 liver
42 chr20:16453200-16458000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr20:16453200-16459600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr20:16453400-16454400 Enhancers K562 blood
45 chr20:16453400-16458000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr20:16453400-16458600 Weak transcription Placenta Placenta
47 chr20:16453400-16470000 Weak transcription Esophagus oesophagus
48 chr20:16453400-16473400 Weak transcription Left Ventricle heart
49 chr20:16453600-16471800 Weak transcription NHEK skin
50 chr20:16453600-16508200 Weak transcription Stomach Mucosa stomach

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015