Variant report

Variant	rs72731708
Chromosome Location	chr9:73570493-73570494
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs34206171	1.00[ASN][1000 genomes]
rs72729794	1.00[ASN][1000 genomes]
rs72729798	1.00[ASN][1000 genomes]
rs72731710	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72731712	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893441	chr9:73486034-73594114	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv430072	chr9:73509677-73640530	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73566600-73570800	Enhancers	NHDF-Ad	bronchial
2	chr9:73567000-73571000	Enhancers	HSMM	muscle
3	chr9:73567000-73571000	Enhancers	HSMMtube	muscle
4	chr9:73567200-73571200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr9:73568200-73571400	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr9:73568400-73570800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr9:73568400-73570800	Enhancers	Placenta Amnion	Placenta Amnion
8	chr9:73568400-73571000	Enhancers	Breast Myoepithelial Primary Cells	Breast
9	chr9:73568800-73571000	Enhancers	iPS-20b Cell Line	embryonic stem cell
10	chr9:73569200-73570800	Enhancers	NHLF	lung
11	chr9:73569800-73571600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr9:73570000-73571000	Enhancers	Osteobl	bone
13	chr9:73570000-73571200	Enhancers	NH-A	brain
14	chr9:73570000-73574400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr9:73570000-73574600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr9:73570200-73571000	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr9:73570200-73571000	Enhancers	NHEK	skin
18	chr9:73570400-73570600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr9:73570400-73571200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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