Variant report

Variant	rs72751680
Chromosome Location	chr5:41070235-41070236
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs72753967	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72753982	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830268	chr5:40897361-41138366	Enhancers Weak transcription ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41069800-41070400	Enhancers	iPS-20b Cell Line	embryonic stem cell
2	chr5:41070000-41070400	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr5:41070000-41070400	Enhancers	HUES6 Cell Line	embryonic stem cell
4	chr5:41070000-41070600	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr5:41070200-41070400	Enhancers	Right Atrium	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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