Variant report

Variant	rs72753361
Chromosome Location	chr5:57426479-57426480
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:57426262..57429245-chr5:57432362..57434884,2	MCF-7	breast:
2	chr5:57422761..57425397-chr5:57425911..57427703,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs72753360	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72755780	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1033051	chr5:57380218-57471801	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57422400-57426600	Weak transcription	Pancreas	Pancrea
2	chr5:57423800-57429200	Weak transcription	Fetal Stomach	stomach
3	chr5:57423800-57429400	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr5:57424000-57428600	Weak transcription	Fetal Brain Male	brain
5	chr5:57424000-57429000	Weak transcription	Brain Germinal Matrix	brain
6	chr5:57424000-57429200	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr5:57424000-57429200	Weak transcription	Fetal Brain Female	brain
8	chr5:57424000-57429200	Weak transcription	Ovary	ovary
9	chr5:57424000-57429200	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr5:57424000-57429400	Weak transcription	HUVEC	blood vessel
11	chr5:57424000-57430000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr5:57424200-57426600	Weak transcription	HSMMtube	muscle
13	chr5:57424200-57426800	Weak transcription	Fetal Lung	lung
14	chr5:57424200-57427400	Weak transcription	HSMM	muscle
15	chr5:57424200-57429200	Weak transcription	Stomach Mucosa	stomach
16	chr5:57424200-57429400	Weak transcription	Cortex derived primary cultured neurospheres	brain
17	chr5:57424200-57429600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr5:57424400-57429000	Weak transcription	Pancreatic Islets	Pancreatic Islet
19	chr5:57424400-57429200	Weak transcription	Fetal Heart	heart
20	chr5:57424800-57426600	Weak transcription	A549	lung
21	chr5:57425000-57426600	Weak transcription	Fetal Muscle Leg	muscle
22	chr5:57425000-57430200	Weak transcription	Fetal Muscle Trunk	muscle

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