The 2.0 version of rSNPBase

Variant report

Variant rs72756519
Chromosome Location chr1:227005029-227005030
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:226994800-227007000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:226995800-227009800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
3 chr1:227001400-227005200 Enhancers NHLF lung
4 chr1:227001600-227005200 Enhancers NHDF-Ad bronchial
5 chr1:227001800-227005200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
6 chr1:227001800-227005200 Enhancers Placenta Amnion Placenta Amnion
7 chr1:227002200-227005200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:227003200-227005400 Enhancers HUVEC blood vessel
9 chr1:227003200-227008000 Weak transcription Right Atrium heart
10 chr1:227003200-227008200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr1:227003400-227005200 Enhancers NH-A brain
12 chr1:227003400-227007600 Weak transcription Left Ventricle heart
13 chr1:227003400-227007800 Weak transcription Brain Substantia Nigra brain
14 chr1:227003400-227008000 Weak transcription Brain Hippocampus Middle brain
15 chr1:227003400-227008200 Weak transcription Colon Smooth Muscle Colon
16 chr1:227003400-227008200 Weak transcription Fetal Lung lung
17 chr1:227003400-227008200 Weak transcription Spleen Spleen
18 chr1:227003400-227008400 Weak transcription Rectal Smooth Muscle rectum
19 chr1:227003400-227008400 Weak transcription Osteobl bone
20 chr1:227003400-227008600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:227003400-227008600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr1:227003400-227008600 Weak transcription Brain Angular Gyrus brain
23 chr1:227003400-227008600 Weak transcription HSMM muscle
24 chr1:227003400-227008600 Weak transcription HSMMtube muscle
25 chr1:227003400-227008800 Weak transcription Muscle Satellite Cultured Cells --
26 chr1:227003400-227009200 Weak transcription Brain Inferior Temporal Lobe brain
27 chr1:227003400-227009200 Weak transcription Right Ventricle heart
28 chr1:227003400-227009400 Weak transcription Small Intestine intestine
29 chr1:227003400-227015000 Weak transcription Thymus Thymus
30 chr1:227003600-227005600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr1:227003600-227007400 Weak transcription Lung lung
32 chr1:227003600-227008200 Weak transcription Stomach Smooth Muscle stomach
33 chr1:227003600-227008800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr1:227003600-227008800 Weak transcription Psoas Muscle Psoas
35 chr1:227003600-227009200 Weak transcription Fetal Muscle Trunk muscle
36 chr1:227004000-227007000 Weak transcription Adipose Nuclei Adipose
37 chr1:227004000-227008200 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr1:227004000-227008800 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr1:227004000-227009200 Weak transcription Esophagus oesophagus
40 chr1:227004000-227009400 Weak transcription Fetal Thymus thymus
41 chr1:227004200-227005200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr1:227004200-227008600 Weak transcription Brain Anterior Caudate brain
43 chr1:227004200-227008600 Weak transcription Fetal Intestine Small intestine
44 chr1:227004200-227009000 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr1:227004200-227011400 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr1:227004600-227005200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr1:227004800-227007000 Weak transcription Placenta Placenta
48 chr1:227004800-227007000 Weak transcription Hela-S3 cervix
49 chr1:227005000-227007200 Weak transcription Fetal Muscle Leg muscle
50 chr1:227005000-227008200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015