Variant report

Variant	rs72758348
Chromosome Location	chr15:83940036-83940037
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs12438298	0.80[AMR][1000 genomes]
rs72758319	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534418	chr15:83770116-83960718	Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:83930600-83940800	Strong transcription	HMEC	breast
2	chr15:83930600-83943600	Strong transcription	NHEK	skin
3	chr15:83931200-83941200	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr15:83932800-83942200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr15:83932800-83942200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr15:83933000-83944400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr15:83933000-83951200	Weak transcription	HSMMtube	muscle
8	chr15:83933200-83940200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr15:83933600-83951600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr15:83933600-83951600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr15:83933800-83945800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
12	chr15:83935600-83941600	Weak transcription	NH-A	brain
13	chr15:83936000-83946400	Weak transcription	NHDF-Ad	bronchial
14	chr15:83936400-83943800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr15:83936400-83946600	Weak transcription	Muscle Satellite Cultured Cells	--
16	chr15:83937400-83944400	Weak transcription	Osteobl	bone
17	chr15:83939000-83944200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr15:83939800-83948200	Weak transcription	HSMM	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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