Variant report

Variant rs7275839
Chromosome Location chr21:48001424-48001425
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47956200-48001800 Weak transcription Stomach Mucosa stomach
2 chr21:47991200-48001600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr21:47991200-48001600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr21:47991200-48001600 Weak transcription Gastric stomach
5 chr21:47991200-48001600 Weak transcription Ovary ovary
6 chr21:47991200-48001600 Weak transcription Pancreas Pancrea
7 chr21:47991200-48001600 Weak transcription Thymus Thymus
8 chr21:47991200-48001600 Weak transcription HUVEC blood vessel
9 chr21:47991400-48002000 Weak transcription Colonic Mucosa Colon
10 chr21:47991400-48005600 Weak transcription Psoas Muscle Psoas
11 chr21:47991600-48001600 Weak transcription Right Ventricle heart
12 chr21:47992600-48001600 Weak transcription Lung lung
13 chr21:47992800-48001600 Weak transcription Placenta Placenta
14 chr21:47993000-48001600 Weak transcription Duodenum Mucosa Duodenum
15 chr21:47993000-48001600 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr21:47993000-48001600 Weak transcription Dnd41 blood
17 chr21:47993000-48001600 Weak transcription NHEK skin
18 chr21:47993000-48001800 Weak transcription A549 lung
19 chr21:47993000-48002200 Weak transcription Placenta Amnion Placenta Amnion
20 chr21:47993000-48003000 Weak transcription NHLF lung
21 chr21:47993000-48005200 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr21:47993200-48001600 Weak transcription Brain Angular Gyrus brain
23 chr21:47993200-48001600 Weak transcription Fetal Thymus thymus
24 chr21:47993200-48001600 Weak transcription Stomach Smooth Muscle stomach
25 chr21:47993200-48004200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr21:47993400-48005000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr21:47993400-48006600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr21:47993600-48001600 Weak transcription Muscle Satellite Cultured Cells --
29 chr21:47993600-48001600 Weak transcription Left Ventricle heart
30 chr21:47993600-48001600 Weak transcription NHDF-Ad bronchial
31 chr21:47994000-48001600 Weak transcription HSMM muscle
32 chr21:47998400-48003800 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr21:47998400-48004000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr21:47998600-48001600 Weak transcription Rectal Smooth Muscle rectum
35 chr21:47999000-48006000 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr21:47999200-48003400 Weak transcription Fetal Intestine Large intestine
37 chr21:47999400-48003200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
38 chr21:47999800-48001600 Weak transcription Spleen Spleen
39 chr21:47999800-48001800 Strong transcription Primary T helper naive cells fromperipheralblood blood
40 chr21:47999800-48005400 Weak transcription Primary T killer memory cells from peripheral blood blood
41 chr21:48000000-48003200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr21:48000200-48002600 ZNF genes & repeats Liver Liver
43 chr21:48000200-48003800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr21:48000600-48001600 Weak transcription Brain Anterior Caudate brain
45 chr21:48000600-48005400 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr21:48000800-48001600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr21:48000800-48002400 ZNF genes & repeats Primary B cells from cord blood blood
48 chr21:48000800-48002600 ZNF genes & repeats Primary T cells from cord blood blood
49 chr21:48000800-48002600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
50 chr21:48000800-48002600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet

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