The 2.0 version of rSNPBase

Variant report

Variant rs72787730
Chromosome Location chr2:30497632-30497633
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30487200-30517800 Enhancers Primary B cells from peripheral blood blood
2 chr2:30488800-30498400 Enhancers Fetal Heart heart
3 chr2:30491600-30499200 Weak transcription GM12878-XiMat blood
4 chr2:30491800-30501600 Weak transcription Primary T cells from cord blood blood
5 chr2:30491800-30501800 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr2:30492600-30501800 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr2:30493400-30506800 Weak transcription Right Ventricle heart
8 chr2:30494600-30499000 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr2:30494600-30499400 Weak transcription Fetal Thymus thymus
10 chr2:30494600-30507200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr2:30494800-30505800 Weak transcription K562 blood
12 chr2:30495200-30498200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
13 chr2:30495400-30497800 Enhancers Placenta Placenta
14 chr2:30495400-30497800 Enhancers Spleen Spleen
15 chr2:30495400-30498400 Enhancers HSMM muscle
16 chr2:30495400-30498400 Enhancers NHLF lung
17 chr2:30495400-30499800 Enhancers Fetal Intestine Large intestine
18 chr2:30495400-30499800 Enhancers Fetal Intestine Small intestine
19 chr2:30495600-30497800 Enhancers Small Intestine intestine
20 chr2:30495600-30498400 Enhancers HUVEC blood vessel
21 chr2:30495600-30498400 Enhancers NHDF-Ad bronchial
22 chr2:30495600-30498600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr2:30495800-30498000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr2:30495800-30498000 Enhancers Fetal Stomach stomach
25 chr2:30495800-30498200 Weak transcription Primary B cells from cord blood blood
26 chr2:30495800-30498400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr2:30495800-30498400 Enhancers Muscle Satellite Cultured Cells --
28 chr2:30495800-30498400 Enhancers Stomach Mucosa stomach
29 chr2:30495800-30498600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr2:30495800-30499600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr2:30495800-30499600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr2:30496000-30497800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
33 chr2:30496000-30499400 Weak transcription Pancreas Pancrea
34 chr2:30496200-30498600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr2:30496400-30509800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr2:30496600-30498600 Enhancers HSMMtube muscle
37 chr2:30496600-30499200 Weak transcription Primary T cells fromperipheralblood blood
38 chr2:30496600-30499200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
39 chr2:30496600-30499400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr2:30496600-30499400 Weak transcription Aorta Aorta
41 chr2:30496600-30501600 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr2:30496600-30524200 Weak transcription Right Atrium heart
43 chr2:30496800-30498400 Enhancers Hela-S3 cervix
44 chr2:30496800-30506800 Weak transcription Left Ventricle heart
45 chr2:30497200-30497800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
46 chr2:30497200-30497800 Enhancers Esophagus oesophagus
47 chr2:30497200-30498200 Enhancers Fetal Lung lung
48 chr2:30497200-30498200 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr2:30497200-30500000 Enhancers Breast Myoepithelial Primary Cells Breast
50 chr2:30497400-30497800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015