Variant report

Variant	rs72788559
Chromosome Location	chr2:21195522-21195523
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10164442	0.83[ASN][1000 genomes]
rs10172650	0.83[ASN][1000 genomes]
rs11124924	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72788558	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:21194400-21195600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr2:21195000-21195600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr2:21195000-21196400	Enhancers	Fetal Muscle Leg	muscle
4	chr2:21195000-21196800	Enhancers	Fetal Stomach	stomach
5	chr2:21195000-21196800	Enhancers	Rectal Smooth Muscle	rectum
6	chr2:21195000-21197000	Enhancers	Aorta	Aorta
7	chr2:21195000-21197000	Enhancers	Colon Smooth Muscle	Colon
8	chr2:21195000-21197000	Enhancers	Ovary	ovary
9	chr2:21195000-21201000	Enhancers	Stomach Smooth Muscle	stomach
10	chr2:21195200-21195600	Enhancers	Fetal Kidney	kidney
11	chr2:21195200-21199200	Weak transcription	Lung	lung
12	chr2:21195200-21199400	Weak transcription	Gastric	stomach
13	chr2:21195400-21195800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr2:21195400-21196800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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