Variant report

Variant rs72788909
Chromosome Location chr2:20571202-20571203
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:20565200-20578400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:20565800-20575200 Weak transcription NH-A brain
3 chr2:20569000-20571800 Enhancers NHEK skin
4 chr2:20569600-20574200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:20569800-20571400 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr2:20570200-20574800 Weak transcription Placenta Placenta
7 chr2:20570200-20578600 Weak transcription Ovary ovary
8 chr2:20570400-20571400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr2:20570800-20571800 Weak transcription Fetal Brain Male brain
10 chr2:20571000-20571600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
11 chr2:20571000-20571600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
12 chr2:20571000-20571800 Enhancers Fetal Stomach stomach
13 chr2:20571200-20571600 Active TSS Fetal Lung lung
14 chr2:20571200-20571600 Active TSS NHLF lung
15 chr2:20571200-20571800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr2:20571200-20571800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr2:20571200-20571800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr2:20571200-20571800 Flanking Active TSS Fetal Brain Female brain
19 chr2:20571200-20571800 Enhancers Fetal Muscle Leg muscle

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