Variant report

Variant rs7279445
Chromosome Location chr21:46919918-46919919
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46898200-46939600 Weak transcription Placenta Amnion Placenta Amnion
2 chr21:46898200-46945000 Weak transcription Right Atrium heart
3 chr21:46898400-46932800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr21:46898400-46937200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr21:46899600-46931400 Weak transcription Brain Cingulate Gyrus brain
6 chr21:46899600-46940400 Weak transcription Rectal Smooth Muscle rectum
7 chr21:46903800-46931000 Weak transcription Thymus Thymus
8 chr21:46904800-46920800 Weak transcription NH-A brain
9 chr21:46904800-46932600 Weak transcription Fetal Lung lung
10 chr21:46906000-46936600 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr21:46906400-46926600 Weak transcription Small Intestine intestine
12 chr21:46909400-46920000 Strong transcription HUES48 Cell Line embryonic stem cell
13 chr21:46909400-46922800 Strong transcription HUES6 Cell Line embryonic stem cell
14 chr21:46910600-46920000 Strong transcription Fetal Muscle Trunk muscle
15 chr21:46910600-46933400 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr21:46910800-46920000 Strong transcription H1 Cell Line embryonic stem cell
17 chr21:46910800-46920200 Weak transcription Primary hematopoietic stem cells blood
18 chr21:46911000-46920000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr21:46911000-46920000 Strong transcription H9 Cell Line embryonic stem cell
20 chr21:46911200-46922800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr21:46911200-46938200 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr21:46911400-46920000 Strong transcription iPS-15b Cell Line embryonic stem cell
23 chr21:46912200-46920000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr21:46912200-46932800 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr21:46912400-46920000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr21:46913000-46920000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr21:46913200-46920000 Strong transcription A549 lung
28 chr21:46915000-46920600 Weak transcription Muscle Satellite Cultured Cells --
29 chr21:46915200-46920400 Strong transcription iPS-20b Cell Line embryonic stem cell
30 chr21:46915800-46926400 Weak transcription Brain Anterior Caudate brain
31 chr21:46916000-46928200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr21:46916000-46931600 Weak transcription HSMM muscle
33 chr21:46916000-46932600 Weak transcription Brain Angular Gyrus brain
34 chr21:46916000-46933000 Weak transcription Brain Substantia Nigra brain
35 chr21:46916000-46938200 Weak transcription Fetal Heart heart
36 chr21:46916000-46939600 Weak transcription Fetal Kidney kidney
37 chr21:46916200-46933400 Weak transcription HSMMtube muscle
38 chr21:46917000-46931600 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr21:46917200-46933200 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr21:46917200-46933800 Weak transcription Brain Inferior Temporal Lobe brain
41 chr21:46917800-46922600 Weak transcription Gastric stomach
42 chr21:46918000-46920000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr21:46918000-46923400 Weak transcription Duodenum Mucosa Duodenum
44 chr21:46918000-46928400 Weak transcription Fetal Intestine Small intestine
45 chr21:46918000-46931400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr21:46918200-46938400 Weak transcription Brain Hippocampus Middle brain
47 chr21:46918400-46920200 ZNF genes & repeats NHEK skin
48 chr21:46918800-46923800 Weak transcription Aorta Aorta
49 chr21:46918800-46937200 Weak transcription HUVEC blood vessel
50 chr21:46919000-46925000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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