Variant report

Variant	rs72801514
Chromosome Location	chr5:154569648-154569649
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs61333606	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72801522	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs72801525	0.91[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:154568600-154569800	Enhancers	iPS-20b Cell Line	embryonic stem cell
2	chr5:154568800-154569800	Enhancers	HUES6 Cell Line	embryonic stem cell
3	chr5:154569000-154569800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr5:154569000-154570000	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr5:154569200-154570000	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr5:154569400-154569800	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr5:154569600-154571200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr5:154569600-154572400	Weak transcription	HUES48 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links