The 2.0 version of rSNPBase

Variant report

Variant rs72809324
Chromosome Location chr10:90677552-90677553
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:90642000-90684800 Weak transcription Brain Inferior Temporal Lobe brain
2 chr10:90642000-90686400 Weak transcription Brain Cingulate Gyrus brain
3 chr10:90647400-90681000 Weak transcription Aorta Aorta
4 chr10:90654000-90687400 Weak transcription Right Ventricle heart
5 chr10:90655200-90701400 Weak transcription Gastric stomach
6 chr10:90657600-90677600 Weak transcription Lung lung
7 chr10:90657600-90686400 Weak transcription Rectal Smooth Muscle rectum
8 chr10:90658600-90686000 Weak transcription Brain Anterior Caudate brain
9 chr10:90659600-90689800 Weak transcription Esophagus oesophagus
10 chr10:90660400-90695000 Weak transcription Fetal Brain Male brain
11 chr10:90660600-90688200 Strong transcription Dnd41 blood
12 chr10:90661600-90678400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr10:90661600-90687600 Strong transcription Primary T helper cells fromperipheralblood blood
14 chr10:90661600-90688800 Strong transcription Primary T regulatory cells fromperipheralblood blood
15 chr10:90661600-90692200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr10:90662000-90683000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr10:90662600-90687600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
18 chr10:90662800-90688800 Strong transcription Primary B cells from peripheral blood blood
19 chr10:90664200-90694600 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr10:90664400-90679400 Weak transcription Thymus Thymus
21 chr10:90664400-90679600 Weak transcription Ovary ovary
22 chr10:90664400-90683800 Weak transcription Colonic Mucosa Colon
23 chr10:90664400-90685600 Weak transcription Monocytes-CD14+_RO01746 blood
24 chr10:90664400-90691200 Weak transcription Small Intestine intestine
25 chr10:90664400-90694800 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr10:90664600-90685400 Weak transcription Fetal Muscle Trunk muscle
27 chr10:90666000-90692200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr10:90667600-90685800 Weak transcription Colon Smooth Muscle Colon
29 chr10:90668200-90683200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr10:90668400-90694800 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr10:90668600-90685800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr10:90669800-90689200 Strong transcription Primary T cells fromperipheralblood blood
33 chr10:90670200-90680400 Strong transcription Primary T helper cells PMA-I stimulated --
34 chr10:90672200-90677600 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr10:90672200-90683800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr10:90672400-90679000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr10:90673800-90678800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr10:90673800-90681000 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr10:90674800-90679600 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr10:90675000-90677600 Strong transcription Fetal Intestine Large intestine
41 chr10:90675000-90678000 Strong transcription Rectal Mucosa Donor 31 rectum
42 chr10:90675000-90679200 Strong transcription Rectal Mucosa Donor 29 rectum
43 chr10:90675000-90680000 Strong transcription Primary T cells from cord blood blood
44 chr10:90675000-90682200 Strong transcription GM12878-XiMat blood
45 chr10:90675200-90679800 Strong transcription Duodenum Mucosa Duodenum
46 chr10:90675600-90677600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr10:90675600-90679000 Strong transcription A549 lung
48 chr10:90675600-90681000 Weak transcription Right Atrium heart
49 chr10:90675600-90685600 Weak transcription Brain Angular Gyrus brain
50 chr10:90675800-90677600 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015